Protein Alignment pAbp and PAB2

DIOPT Version :9

• Sequence 1: NP_476667.1
• Gene: pAbp / 37070
• FlyBaseID: FBgn0265297
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_195137.5
• Gene: PAB2 / 829557
• AraportID: AT4G34110
• Length: 629
• Species: Arabidopsis thaliana
• Alignment Length: 656
• Identity: 287/656 - (43%)
• Similarity: 380/656 - (57%)
• Gaps: 113/656 - (17%)

  Fly     3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNFDL 67
            |||||||..:|.:|.|||.|...|.|:::|||||::|||||||.||||..|.||.||:..:|:..
plant    37 SLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIP 101

  Fly    68 VRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGY 132
            :..||||:|:|.||||:||||.||:||||||.:||:||::||||:||||:|||||.|..|.||||
plant   102 LYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGY 166

  Fly   133 GFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDE 197
            |||.:..||:|..:|:|:||||||.|:||||.|:.|:||: ....|.| ||||||||..|...|:
plant   167 GFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERD-STANKTK-FTNVYVKNLAESTTDD 229

  Fly   198 KLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKK 262
            .||..|..||||||..||...:|||||||||.||..:.|..||::|||... :.|..||.|||||
plant   230 DLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKF-DDKEWYVGRAQKK 293

  Fly   263 AERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGRSK 327
            :||:.||:.::|:..::..:.....||||||||.:|.|::|:..|||:|.:||:|||.|..|.||
plant   294 SERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSK 358

  Fly   328 GFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERKAHLASQY-------MRHMTGMRM 385
            |.|||.|....|||.|:::|:|:::.|||||||:|||||:|:..|.:|:       |:...|.||
plant   359 GSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRM 423

  Fly   386 QQLGQIYQPNAASGFFVPTLPSNQRFFGSQVATQMRNTPRW------VPQVRPPAAIQGVQAGAA 444
                .:|.|..      |.: ..|.|:|......:...|.:      ||.:||
plant   424 ----PVYPPGG------PGI-GQQMFYGQAPPAMIPPQPGYGYQQQLVPGMRP------------ 465

  Fly   445 AAGGFQGTAGAVPTQFRSAAAGARGAQPQVQGTHAAAAAANNMRNTGARAITGQQTAAPNMQIP- 508
              ||     |.||:.|          .|.||                           |..|.|
plant   466 --GG-----GPVPSFF----------MPMVQ---------------------------PQQQRPG 486

  Fly   509 GAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQP----------------IPQQLQGKNSEKLI- 556
            |.:..||.|.        |..:||.:.|  |..|                :|....|.|....|
plant   487 GGRRPGGIQH--------SQQQNPMMQQ--QMHPRGRMFRYPQGRGGSGDVPPYDMGNNMPLTIG 541

  Fly   557 --ASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEE 619
              ||.|:||.|::|:.:|||.|||::|.:.|..|.|:||||||::.:|:||::|..|||||||.|
plant   542 ALASNLSNATPEQQRTMLGEVLYPLVEQVEAESAAKVTGMLLEMDQTEVLHLLESPEALKAKVAE 606

  Fly   620 AVAVLQ 625
            |:.||:
plant   607 AMDVLR 612

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pAbp	NP_476667.1	PABP-1234	2..625	CDD:130689	286/654 (44%)
PAB2	NP_195137.5	PABP-1234	37..612	CDD:130689	286/654 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	103	1.000	Domainoid score	I2252
eggNOG	1	0.900	-	-		E1_KOG0123
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	490	1.000	Inparanoid score	I329
OMA	1	1.010	-	-		QHG53624
OrthoDB	1	1.010	-	-		D1027234at2759
OrthoFinder	1	1.000	-	-		FOG0000294
OrthoInspector	1	1.000	-	-		otm2763
orthoMCL	1	0.900	-	-		OOG6_100425
Panther	1	1.100	-	-	O	PTHR24012
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X269
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	14	13.840