Protein Alignment pAbp and PAB7

DIOPT Version :9

• Sequence 1: NP_476667.1
• Gene: pAbp / 37070
• FlyBaseID: FBgn0265297
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_181204.1
• Gene: PAB7 / 818238
• AraportID: AT2G36660
• Length: 609
• Species: Arabidopsis thaliana
• Alignment Length: 637
• Identity: 230/637 - (36%)
• Similarity: 332/637 - (52%)
• Gaps: 75/637 - (11%)

  Fly     2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNFD 66
            ||||||||...|.|..|:|.|:....:.|:|:|:|..:.|||.|.|.||....||..|::..|..
plant    24 ASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKKNNS 88

  Fly    67 LVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKG 131
            |:..|.||:|||.|.|..||:||||||:|||..::.|..:.|.|..||||:||||||.|.|.|:|
plant    89 LLNGKMIRVMWSVRAPDARRNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRG 153

  Fly   132 YGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDD 196
            ||||.||.|:||:.:|..:|..::..|::|||||:.:.:|.|. .||   :||:|:||...|..:
plant   154 YGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDRVKP-EEK---YTNLYMKNLDADVSE 214

  Fly   197 EKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQK 261
            :.|:|.|..:|||.|..:...|:...:|:.||.|:..|.|..|.:.:||...| .|.|||.||||
plant   215 DLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAETVNGTKFG-SKCLYVGRAQK 278

  Fly   262 KAERQQELKRKFEELKQKRHESVFGV-NLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGR 325
            ||||:|.|:.:|:| |.:..:.:..| |:||||::..:.::.||..||..|.|||.|:|.||:|:
plant   279 KAEREQLLREQFKE-KHEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGK 342

  Fly   326 SKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQ 390
            |||||||||:...||..||...:|::...||||||:||:||:||..|..|:     |.|::....
plant   343 SKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIAQKKEDRKMQLQVQF-----GNRVEARKS 402

  Fly   391 IYQPNAASGFFVPTLPSNQRFFGSQVATQMRNTPRWVPQVRPPAAIQGVQAGAAAAGGFQGTAGA 455
            ....:...|.:.|...:|..             |..|.|                         :
plant   403 SSSASVNPGTYAPLYYTNTH-------------PGMVYQ-------------------------S 429

  Fly   456 VPTQFRSA---AAGARGAQPQVQGTHAAAAAANNMRNTGARAITGQQTAAPNMQIPGAQIAGGAQ 517
            .|..::||   .:....::........|.|.:.|.:|...:......:..||:
plant   430 YPLMWKSANMIGSSYPNSEAVTYPPMVANAPSKNRQNRIGKLDRNAVSYVPNV------------ 482

  Fly   518 QRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGKNSEKLIASLLANAKPQEQKQILGERLYPMIEH 582
                   |.|....|......:.|......:||..:|.|....:.....|. |:|||.|:|::|.
plant   483 -------YQSTQMLPLSRDFSKQQHSRTYGRGKEMKKSIQQRQSETVGMEM-QLLGELLHPLVEK 539

  Fly   583 MHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQVHR--VTEP 632
            :...||.||||||||::.||||.:::..|.|..:|:||..||:..:  :|.|
plant   540 LEPQLANKITGMLLEMDKSELLLLLKSPEDLAVRVDEAFEVLKSSKTNLTAP 591

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pAbp	NP_476667.1	PABP-1234	2..625	CDD:130689	227/626 (36%)
PAB7	NP_181204.1	PABP-1234	24..582	CDD:130689	227/626 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0123
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1027234at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	4	3.780