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Protein Alignment pAbp and pabpc4
DIOPT Version :9
Sequence 1: | NP_476667.1 |
Gene: | pAbp / 37070 |
FlyBaseID: | FBgn0265297 |
Length: | 634 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001361458.1 |
Gene: | pabpc4 / 548470 |
XenbaseID: | XB-GENE-485185 |
Length: | 626 |
Species: | Xenopus tropicalis |
Alignment Length: | |
Identity: | / - (0%) |
Similarity: | / - (0%) |
Gaps: | / - (0%) |
- Green bases have known domain annotations that are detailed below.
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
pAbp | NP_476667.1 |
PABP-1234 |
2..625 |
CDD:130689 |
|
pabpc4 | NP_001361458.1 |
PABP-1234 |
11..607 |
CDD:130689 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
122 |
1.000 |
Domainoid score |
I5572 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
689 |
1.000 |
Inparanoid score |
I681 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1027234at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000294 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm49359 |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR24012 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X269 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
7 | 7.160 |
|
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