Sequence 1: | NP_476667.1 | Gene: | pAbp / 37070 | FlyBaseID: | FBgn0265297 | Length: | 634 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001005062.1 | Gene: | pabpc1l / 448615 | XenbaseID: | XB-GENE-5742459 | Length: | 629 | Species: | Xenopus tropicalis |
Alignment Length: | 646 | Identity: | 355/646 - (54%) |
---|---|---|---|
Similarity: | 436/646 - (67%) | Gaps: | 52/646 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNF 65
Fly 66 DLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSK 130
Fly 131 GYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFD 195
Fly 196 DEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQ 260
Fly 261 KKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGR 325
Fly 326 SKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQ--- 387
Fly 388 LGQIYQPNAASGFFVPTLPS--NQRFFGSQVATQMRNTPRWV------PQVRPPAAIQGVQAGAA 444
Fly 445 AAGGFQGTAGAVPTQFRSAAAGARGAQPQVQ--GTHAAAAAANNMRNTGARAITGQQTAAPNMQI 507
Fly 508 PGAQIAGGAQQRTSNYKYTSNMRN--PPVPQLHQTQPIPQQLQGKNSEKLIASLLANAKPQEQKQ 570
Fly 571 ILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQVHRVTE 631 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pAbp | NP_476667.1 | PABP-1234 | 2..625 | CDD:130689 | 351/637 (55%) |
pabpc1l | NP_001005062.1 | PABP-1234 | 11..612 | CDD:130689 | 351/637 (55%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 122 | 1.000 | Domainoid score | I5572 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 689 | 1.000 | Inparanoid score | I681 |
OMA | 1 | 1.010 | - | - | QHG53624 | |
OrthoDB | 1 | 1.010 | - | - | D1027234at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000294 | |
OrthoInspector | 1 | 1.000 | - | - | otm49359 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR24012 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X269 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 10.080 |