Protein Alignment pAbp and pabpc1

DIOPT Version :9

• Sequence 1: NP_476667.1
• Gene: pAbp / 37070
• FlyBaseID: FBgn0265297
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_001005051.1
• Gene: pabpc1 / 448595
• XenbaseID: XB-GENE-963457
• Length: 634
• Species: Xenopus tropicalis
• Alignment Length: 642
• Identity: 384/642 - (59%)
• Similarity: 458/642 - (71%)
• Gaps: 38/642 - (5%)

  Fly     1 MASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNF 65
            |||||||||..||.|:.|::|||.|||:||||||||:||||||||||||||||||||||||||||
 Frog    10 MASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNF 74

  Fly    66 DLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSK 130
            |:::.||:||||||||||||:|||||:||||||::|||||:|||||||||||||||..||.| ||
 Frog    75 DVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SK 138

  Fly   131 GYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFD 195
            |||||||||:|||..:|||:||||||.:||:||:|..|||||.|||.:||.|||||:|||.||.|
 Frog   139 GYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMD 203

  Fly   196 DEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQ 260
            ||:|||.|..||...|.|||:.::|||||||||:||..|.|:.||..:||||| .||::||.|||
 Frog   204 DERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDDMNGKDM-NGKAIYVGRAQ 267

  Fly   261 KKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGR 325
            ||.|||.|||||||::||.|.....|||||||||||.|||:|||..|||:|.|||||||. |.||
 Frog   268 KKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM-EGGR 331

  Fly   326 SKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERKAHLASQYMRHMTGMRM-QQLG 389
            |||||||||::..|||.||||:|||:|.:||||||||||||||:|||.:|||:.|..:|: ..:.
 Frog   332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRVPNPVI 396

  Fly   390 QIYQPNAASGFFVPTLPSNQR---FFGSQVATQMRNTPRWVPQVRPPAAIQGVQAGAAAAGGFQG 451
            ..|||..:|.|.....|:..|   :...|:| |:|.:|||..|...|...|.:      .|..:.
 Frog   397 NPYQPPPSSYFMAAIPPAQNRAAYYPPGQIA-QLRPSPRWTAQGARPHPFQNM------PGAIRP 454

  Fly   452 TAGAVPTQFRSAAAGARGAQPQVQGTHAAAAAANNMRNTGARAITGQQTAAPNMQIPGAQIAGGA 516
            ||...||     .:..|.|..||....:|...||          |..||..|. ....|..|..|
 Frog   455 TAPRPPT-----FSTMRPASNQVPRVVSAQRVAN----------TSTQTMGPR-PTTAAAAATSA 503

  Fly   517 QQRTSNYKYTSNMRNP-----PVPQLHQTQPIPQQLQGKNSEKLIASLLANAKPQEQKQILGERL 576
            .:....|||.:.:|||     ..||:...|| ...:||:  |.|.||:||.|.||||||:|||||
 Frog   504 VRTVPQYKYAAGVRNPQQHLNTQPQVAMQQP-AVHVQGQ--EPLTASMLAAAPPQEQKQMLGERL 565

  Fly   577 YPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQVHRVTEPA 633
            :|:|:.||..||||||||||||:|||||||:|..|:|::||:|||||||.|:..|.|
 Frog   566 FPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAA 622

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pAbp	NP_476667.1	PABP-1234	2..625	CDD:130689	378/631 (60%)
pabpc1	NP_001005051.1	PABP-1234	11..614	CDD:130689	378/631 (60%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	122	1.000	Domainoid score	I5572
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	689	1.000	Inparanoid score	I681
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1027234at2759
OrthoFinder	1	1.000	-	-		FOG0000294
OrthoInspector	1	1.000	-	-		otm49359
Panther	1	1.100	-	-	O	PTHR24012
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2216
SonicParanoid	1	1.000	-	-		X269
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	8	8.190