Protein Alignment pAbp and CG5213

DIOPT Version :9

• Sequence 1: NP_476667.1
• Gene: pAbp / 37070
• FlyBaseID: FBgn0265297
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_650473.1
• Gene: CG5213 / 41892
• FlyBaseID: FBgn0038345
• Length: 251
• Species: Drosophila melanogaster
• Alignment Length: 233
• Identity: 58/233 - (24%)
• Similarity: 104/233 - (44%)
• Gaps: 35/233 - (15%)

  Fly   150 VNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKV 214
            :.||...|:.|.....:|          ..::.||:.:....:|..:.:|...|..:|:|...|:
  Fly    18 IRGMFQTGRPVDPPPPLP----------NLRMKTNLILNYLPQDMTESELHRLFSKFGEIRKAKI 72

  Fly   215 M-SKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQ 278
            : .:..|.|..:|||.:.:...|.|||..::|.:. .||.|.||.|                 :.
  Fly    73 IRHRRTGISCCYGFVDYVSERQAAAAVNGMDGYET-RGKRLKVAFA-----------------RP 119

  Fly   279 KRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDE-EGRSKGFGFVCFNAASEATC 342
            ..:||. ..:|||.||...:|:.::|..|:.||||....::..: ..||:|..|:.|....:|..
  Fly   120 SEYEST-SSSLYVGNLPTYMDEKKVRELFATYGNIVDVNLLRHKFNNRSRGVAFLQFELVRDAEV 183

  Fly   343 AVTELNGRVV--GSKPLYVALAQRKEERKAHLA--SQY 376
            |...::..::  .|:||.|...:|:::..:..:  |||
  Fly   184 AKYGMDRYMIEGASRPLTVKFVEREKKGSSSTSSGSQY 221

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pAbp	NP_476667.1	PABP-1234	2..625	CDD:130689	58/233 (25%)
CG5213	NP_650473.1	RRM1_Hu_like	41..117	CDD:240821	23/76 (30%)
		RRM	128..202	CDD:214636	22/73 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439577
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840