DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment pAbp and CG1316

DIOPT Version :9

Sequence 1:	NP_476667.1	Gene:	pAbp / 37070	FlyBaseID:	FBgn0265297	Length:	634	Species:	Drosophila melanogaster
Sequence 2:	NP_647887.1	Gene:	CG1316 / 38526	FlyBaseID:	FBgn0035526	Length:	470	Species:	Drosophila melanogaster

Alignment Length:	187	Identity:	50/187 - (26%)
Similarity:	84/187 - (44%)	Gaps:	35/187 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly   196 DEKLKEFFEPYGKITS-YKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGE-GKSLYVAR 258
            :|..:|.|.|||:|.. :.|..|...::||..:|.|..|..|..|.:.:|||.:|: .::|.|..
  Fly    40 EEDFREAFSPYGEIEDIWVVKDKHTQENKGIAYVKFSKTSDAAKAQEEMNGKTIGKMDRTLKVLV 104

  Fly   259 AQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDE- 322
            |   |.|.|...:  .|.:|:::..:|.|      :..|..::.:|..||.:|::.|..::.::
  Fly   105 A---ANRNQGSNK--SENEQEKYVRLFIV------IPKTATEEDIREEFSQWGDVESVTIVKEKN 158

  Fly   323 EGRSKGFGFVCFN-----AASEATCAV----------------TELNGRVVGSKPLY 358
            .|..||||:|.|.     |.:...|:.                .:..||.....|||
  Fly   159 NGNPKGFGYVRFTKFYYAAVAFENCSAKYKAVFAEPKGSTRTQRDQYGRPSEDNPLY 215

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
pAbp	NP_476667.1	PABP-1234	2..625	CDD:130689	50/187 (27%)
CG1316	NP_647887.1	RRM1_RBM45	25..105	CDD:240812	22/64 (34%)
		RRM2_RBM45	122..195	CDD:240813	17/78 (22%)
		RRM3_RBM45	267..339	CDD:240814
		RRM4_RBM45	383..449	CDD:240815
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439611
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930