Sequence 1: | NP_476667.1 | Gene: | pAbp / 37070 | FlyBaseID: | FBgn0265297 | Length: | 634 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_958453.1 | Gene: | pabpc4 / 321035 | ZFINID: | ZDB-GENE-030131-9663 | Length: | 637 | Species: | Danio rerio |
Alignment Length: | 647 | Identity: | 388/647 - (59%) |
---|---|---|---|
Similarity: | 467/647 - (72%) | Gaps: | 49/647 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNF 65
Fly 66 DLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSK 130
Fly 131 GYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFD 195
Fly 196 DEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQ 260
Fly 261 KKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGR 325
Fly 326 SKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQ 390
Fly 391 I---YQPNAASGFFVPTLPSNQR---FFGSQVATQMRNTPRWVPQVRPPAAIQGVQAGAAAAGGF 449
Fly 450 QGTAGAVPTQFRSAAAGARGAQPQVQGTHAAAAAANNMRNTGARAI-TGQQTAAPNMQIPGAQIA 513
Fly 514 GG--AQQRTSNYKYTSNMRN--PPVPQ---LHQTQPIPQQLQGKNSEKLIASLLANAKPQEQKQI 571
Fly 572 LGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQVHRVTEPA 633 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pAbp | NP_476667.1 | PABP-1234 | 2..625 | CDD:130689 | 383/636 (60%) |
pabpc4 | NP_958453.1 | PABP-1234 | 12..614 | CDD:130689 | 383/636 (60%) |
RRM1_I_PABPs | 13..92 | CDD:240824 | 65/78 (83%) | ||
RRM2_I_PABPs | 98..173 | CDD:240825 | 57/75 (76%) | ||
RRM3_I_PABPs | 191..270 | CDD:240826 | 43/79 (54%) | ||
RRM4_I_PABPs | 294..371 | CDD:240827 | 61/77 (79%) | ||
PABP | 546..613 | CDD:279051 | 49/66 (74%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 122 | 1.000 | Domainoid score | I5579 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H37855 | |
Inparanoid | 1 | 1.050 | 696 | 1.000 | Inparanoid score | I658 |
OMA | 1 | 1.010 | - | - | QHG53624 | |
OrthoDB | 1 | 1.010 | - | - | D1027234at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000294 | |
OrthoInspector | 1 | 1.000 | - | - | otm25179 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100425 | |
Panther | 1 | 1.100 | - | - | O | PTHR24012 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X269 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.980 |