Protein Alignment pAbp and Pabpc1l2a

DIOPT Version :10

• Sequence 1: NP_476667.1
• Gene: pAbp / 37070
• FlyBaseID: FBgn0265297
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_001388053.1
• Gene: Pabpc1l2a / 302405
• RGDID: 1566367
• Length: 229
• Species: Rattus norvegicus
• Alignment Length: 196
• Identity: 131/196 - (66%)
• Similarity: 161/196 - (82%)
• Gaps: 1/196 - (0%)

  Fly     2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNFD 66
            ||||||||..:|.||.|::|||.|||:||||:|||.:|||||||||||:|||.||:|||:|||||
  Rat    31 ASLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKRALETMNFD 95

  Fly    67 LVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKG 131
            ::..:|:||||||||||||:|||||||||||.:.|||||:|:.|||||||||||||.|||| .||
  Rat    96 VINGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKG-PKG 159

  Fly   132 YGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDD 196
            ||||||:.:|:|..:||.:|||.||.:|::||:|...||||.|.|..|:..|:...|:|.:|.||
  Rat   160 YGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKEREAERGAWARQSTSADFKDFDDDSDD 224

  Fly   197 E 197
            |
  Rat   225 E 225

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pAbp	NP_476667.1	PABP-1234	2..625	CDD:130689	131/196 (67%)
Pabpc1l2a	NP_001388053.1	PABP-1234	31..>201	CDD:130689	120/170 (71%)