| Sequence 1: | NP_476667.1 | Gene: | pAbp / 37070 | FlyBaseID: | FBgn0265297 | Length: | 634 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_570951.2 | Gene: | Pabpc4 / 230721 | MGIID: | 2385206 | Length: | 660 | Species: | Mus musculus |
| Alignment Length: | 658 | Identity: | 390/658 - (59%) |
|---|---|---|---|
| Similarity: | 471/658 - (71%) | Gaps: | 44/658 - (6%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNF 65
Fly 66 DLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSK 130
Fly 131 GYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFD 195
Fly 196 DEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQ 260
Fly 261 KKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGR 325
Fly 326 SKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQ 390
Fly 391 I---YQPNAASGFFVPTLPSNQ---RFFGSQVATQMRNTPRWVPQVRPPAAIQGVQAGAAAAGGF 449
Fly 450 QGTAGAVPTQFRSAAAGARGAQPQVQ--GTHAAAAAANNMRNTGA--RAIT------GQQTAAPN 504
Fly 505 MQIPGAQIAGGAQQRTSNYKYTSNMRNP---------PVPQLHQTQPIPQQLQGKNSEKLIASLL 560
Fly 561 ANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQ 625
Fly 626 VHRVTEPA 633 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| pAbp | NP_476667.1 | PABP-1234 | 2..625 | CDD:130689 | 385/647 (60%) |
| Pabpc4 | NP_570951.2 | PABP-1234 | 11..640 | CDD:130689 | 385/647 (60%) |
| RRM1_I_PABPs | 12..91 | CDD:240824 | 65/78 (83%) | ||
| RRM2_I_PABPs | 97..172 | CDD:240825 | 58/75 (77%) | ||
| RRM3_I_PABPs | 190..269 | CDD:240826 | 45/79 (57%) | ||
| RRM4_I_PABPs | 293..370 | CDD:240827 | 60/77 (78%) | ||
| PABP | 572..639 | CDD:279051 | 49/66 (74%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 121 | 1.000 | Domainoid score | I5666 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0123 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H37855 | |
| Inparanoid | 1 | 1.050 | 705 | 1.000 | Inparanoid score | I653 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG53624 | |
| OrthoDB | 1 | 1.010 | - | - | D1027234at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000294 | |
| OrthoInspector | 1 | 1.000 | - | - | otm44188 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_100425 | |
| Panther | 1 | 1.100 | - | - | O | PTHR24012 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2216 |
| SonicParanoid | 1 | 1.000 | - | - | X269 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 15 | 14.870 | |||||