Protein Alignment pAbp and Pabpc4

DIOPT Version :10

• Sequence 1: NP_476667.1
• Gene: pAbp / 37070
• FlyBaseID: FBgn0265297
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_570951.2
• Gene: Pabpc4 / 230721
• MGIID: 2385206
• Length: 660
• Species: Mus musculus
• Alignment Length: 658
• Identity: 390/658 - (59%)
• Similarity: 471/658 - (71%)
• Gaps: 44/658 - (6%)

  Fly     1 MASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNF 65
            |||||||||..||.|:.|::|||.||||||||||||:||||||||||||||||||||||||||||
Mouse    10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNF 74

  Fly    66 DLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSK 130
            |:::.|||||||||||||||:||||||||||||::|||||:|||||||||||||||..||.| ||
Mouse    75 DVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SK 138

  Fly   131 GYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFD 195
            ||.||||||:|||:.:|:|:||||||.:||:||:|..|||||.|||.|||.|||||:|||.|:.|
Mouse   139 GYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVD 203

  Fly   196 DEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQ 260
            |..|||.|..:||..|.|||....|||||||||::|..|.|..||:.:|||:| .||:::|.|||
Mouse   204 DGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEM-SGKAIFVGRAQ 267

  Fly   261 KKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGR 325
            ||.|||.|||||||:|||:|.....|||||:|||||||||::||..|||:|:|||||||. |:||
Mouse   268 KKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVML-EDGR 331

  Fly   326 SKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQ 390
            |||||||||::..|||.||||:|||:|||||||||||||||||||||.:|||:.:.|||......
Mouse   332 SKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPASA 396

  Fly   391 I---YQPNAASGFFVPTLPSNQ---RFFGSQVATQMRNTPRWVPQVRPPAAIQGVQAGAAAAGGF 449
            |   :|| ||.|:|||.:|..|   .::......|||..||| .|...|...||:.:....:|..
Mouse   397 ILNQFQP-AAGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRW-QQGGRPQGFQGMPSALRQSGPR 459

  Fly   450 QGTAGAVPTQFRSAAAGARGAQPQVQ--GTHAAAAAANNMRNTGA--RAIT------GQQTAAPN 504
            .......||   ..|..:||.....|  |:......|.:....||  :.:|      |..||.||
Mouse   460 PALRHLAPT---GNAPASRGLPTTAQRVGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVPN 521

  Fly   505 MQIPGAQIAGGAQQRTSNYKYTSNMRNP---------PVPQLHQTQPIPQQLQGKNSEKLIASLL 560
            : .|.|.:|..|.:..:.|||.|::|:|         |.|.:|        :||:  |.|.||:|
Mouse   522 L-APRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVH--------VQGQ--EPLTASML 575

  Fly   561 ANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQ 625
            |.|.||||||:|||||:|:|:.||:|||||||||||||:|||||||:|..|:|::||:|||||||
Mouse   576 AAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQ 640

  Fly   626 VHRVTEPA 633
            .|...:.|
Mouse   641 AHHAKKEA 648

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pAbp	NP_476667.1	PABP-1234	2..625	CDD:130689	385/647 (60%)
Pabpc4	NP_570951.2	PABP-1234	11..640	CDD:130689	385/647 (60%)