| Sequence 1: | NP_476667.1 | Gene: | pAbp / 37070 | FlyBaseID: | FBgn0265297 | Length: | 634 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_035010.3 | Gene: | Ncl / 17975 | MGIID: | 97286 | Length: | 707 | Species: | Mus musculus |
| Alignment Length: | 365 | Identity: | 97/365 - (26%) |
|---|---|---|---|
| Similarity: | 172/365 - (47%) | Gaps: | 50/365 - (13%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 3 SLYVGDL--PQDVNE-----SGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERAL 60
Fly 61 DTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDE 125
Fly 126 KGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKV---YVGKFIPRKEREKELGEKAKLFTNVYV 187
Fly 188 KNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGK 252
Fly 253 SLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAK 317
Fly 318 VMTDEE-GRSKGFGFVCFNAASEATCAVTEL-NGRVVGSK 355 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| pAbp | NP_476667.1 | PABP-1234 | 2..625 | CDD:130689 | 97/365 (27%) |
| Ncl | NP_035010.3 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..308 | ||
| 8 X 8 AA tandem repeats of X-T-P-X-K-K-X-X | 58..135 | ||||
| RRM1_NCL | 309..383 | CDD:240849 | 25/81 (31%) | ||
| RRM2_NCL | 392..467 | CDD:240850 | 16/78 (21%) | ||
| RRM3_NCL | 486..558 | CDD:240851 | 22/93 (24%) | ||
| RRM4_NCL | 569..646 | CDD:240852 | 26/71 (37%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 639..707 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG0123 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||