| Sequence 1: | NP_476667.1 | Gene: | pAbp / 37070 | FlyBaseID: | FBgn0265297 | Length: | 634 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_599180.1 | Gene: | Pabpc1 / 171350 | RGDID: | 619838 | Length: | 636 | Species: | Rattus norvegicus |
| Alignment Length: | 646 | Identity: | 384/646 - (59%) |
|---|---|---|---|
| Similarity: | 459/646 - (71%) | Gaps: | 45/646 - (6%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNF 65
Fly 66 DLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSK 130
Fly 131 GYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFD 195
Fly 196 DEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQ 260
Fly 261 KKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGR 325
Fly 326 SKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQ 390
Fly 391 I--YQPNAASGFFVPTLPSNQR----FFGSQVATQMRNTPRWVPQ-VRPPAAIQGVQAGAAAAGG 448
Fly 449 FQGTAGAV-PTQFRSAAAGARGAQPQVQGTHAAAAAANNMRNTGARAITGQQTAAPNMQIPGAQI 512
Fly 513 AGGAQQRTSNYKYTSNMRNP-----PVPQLHQTQPIPQQLQGKNSEKLIASLLANAKPQEQKQIL 572
Fly 573 GERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQVHRVTEPA 633 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| pAbp | NP_476667.1 | PABP-1234 | 2..625 | CDD:130689 | 378/635 (60%) |
| Pabpc1 | NP_599180.1 | PABP-1234 | 11..615 | CDD:130689 | 378/635 (60%) |
| RRM1_I_PABPs | 12..91 | CDD:240824 | 63/78 (81%) | ||
| RRM2_I_PABPs | 97..172 | CDD:240825 | 58/75 (77%) | ||
| UNR-binding. /evidence=ECO:0000250 | 166..289 | 78/123 (63%) | |||
| RRM3_I_PABPs | 190..269 | CDD:240826 | 48/79 (61%) | ||
| RRM4_I_PABPs | 293..370 | CDD:240827 | 59/77 (77%) | ||
| PABP | 547..614 | CDD:279051 | 48/66 (73%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 122 | 1.000 | Domainoid score | I5502 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0123 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 708 | 1.000 | Inparanoid score | I621 |
| OMA | 1 | 1.010 | - | - | QHG53624 | |
| OrthoDB | 1 | 1.010 | - | - | D1027234at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000294 | |
| OrthoInspector | 1 | 1.000 | - | - | otm46281 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_100425 | |
| Panther | 1 | 1.100 | - | - | O | PTHR24012 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X269 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 13 | 12.840 | |||||