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Protein Alignment Pcl and IRR1

DIOPT Version :9

Sequence 1:	NP_001261067.1	Gene:	Pcl / 37069	FlyBaseID:	FBgn0003044	Length:	1043	Species:	Drosophila melanogaster
Sequence 2:	NP_012238.1	Gene:	IRR1 / 854786	SGDID:	S000001288	Length:	1150	Species:	Saccharomyces cerevisiae

Alignment Length:	345	Identity:	69/345 - (20%)
Similarity:	118/345 - (34%)	Gaps:	146/345 - (42%)

- Green bases have known domain annotations that are detailed below.

  Fly   564 NNGIEFVRRMQIEWVD-------------VLHIALYNLRKHQHQKYHHLLNDIWPFILE--QRHQ 613
            ||   ||.|:.|.:.|             ::.:|.:||.|             |..|:|  :.::
Yeast   834 NN---FVSRIPIMFQDFDDSTAQEINFKMLVLLATWNLEK-------------WREIIEKVRDYE 882

  Fly   614 LPICEKWRTL--PETALMERL----------KQTLKDYSDRF--------------VCGREFK-R 651
            ..|.:..|::  |..|::.||          .:|.::.:..|              |..:.|: :
Yeast   883 NSISKDLRSVWKPIAAIIGRLNTLVISLAATNETFENINSLFYLKWSACTSLMDIIVAIKIFELK 947

  Fly   652 APA--------------FYALRHSGPPHIPKVFLEPHEELSDELLEKRFKLML-MPEEPDEGANE 701
            .||              || |..:....:.|:||     ..:.|..|:..:.| ...:.|...|:
Yeast   948 LPADATTWRYSMSEQFPFY-LHDNASKVLLKIFL-----YLESLFAKQVDVQLERVADEDANLND 1006

  Fly   702 LPKR---------------VPKDVYEFN-TDE---------------------DDPVETSEDEIP 729
            ||:.               ..|.:.:.| .||                     ||.:  .|:..|
Yeast  1007 LPETGFFENIETEFLLFTVKLKGLMKLNILDERFASRVALNKEKLGPLFKKIVDDTI--MENPEP 1069

  Fly   730 IKQIIEKAKKQAAQKADKHDELPLKP------DLADDNANDGDPGKLPAPIPPLLDANSSRKRKA 788
            .|:.|:|||....|:    ::.||:|      |.|:...||.|       ||..:|
Yeast  1070 NKKNIQKAKSNQTQR----EKAPLQPNSERETDHANTENNDPD-------IPMTID--------- 1114

  Fly   789 FRLSKRYDNSRNHCDLSSDE 808
              |....::|:|:.:|:..|
Yeast  1115 --LEPIEESSQNNSELAPIE 1132

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.