DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcl and HAT3.1

DIOPT Version :9

Sequence 1:NP_001261067.1 Gene:Pcl / 37069 FlyBaseID:FBgn0003044 Length:1043 Species:Drosophila melanogaster
Sequence 2:NP_001326497.1 Gene:HAT3.1 / 821485 AraportID:AT3G19510 Length:723 Species:Arabidopsis thaliana


Alignment Length:496 Identity:98/496 - (19%)
Similarity:163/496 - (32%) Gaps:168/496 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   471 KPMKMQQPVSHKITKPAGICRQLPYHADKLS---------WDEKHRVNEEQIYC-YCG-KPGKFD 524
            :|.|..:..:.:|.:.....|.|..|.|.|.         :|....::.|.|:| .|| |....|
plant   215 RPEKELERATKEILRRKLKIRDLFQHLDTLCAEGSLPESLFDTDGEISSEDIFCAKCGSKDLSVD 279

  Fly   525 HNMLQCCK-CRNWFHTQCMQ-NFKKKLLRGDMFFVFC--CTVCNNGIEFVRRMQIEWVDVLHIAL 585
            ::::.|.. |...||..|:: ..:|:.:..|.....|  |...::.::                 
plant   280 NDIILCDGFCDRGFHQYCLEPPLRKEDIPPDDEGWLCPGCDCKDDSLD----------------- 327

  Fly   586 YNLRKHQHQKYHHLLNDIWPFILEQRHQLPICEKW-RTLPETALM-----ERLKQTL-KDYSDRF 643
                         ||||      ....:..:.:.| :..||.|..     :.|...| .|.||  
plant   328 -------------LLND------SLGTKFSVSDSWEKIFPEAAAALVGGGQNLDCDLPSDDSD-- 371

  Fly   644 VCGREFKRAPAFYALRHSGPPHIPKVF---------LEPHEE---------------LSDELLEK 684
              ..|:.                |...         .:.:||               .|||::|.
plant   372 --DEEYD----------------PDCLNDNENDEDGSDDNEESENEDGSSDETEFTSASDEMIES 418

  Fly   685 RFKLMLMPEEPDEGANELPKRVPKDVYEFNTD--EDDPVE----TSEDEIPIKQIIEKAKKQAAQ 743
             ||         ||     |.:.|||....:|  |||..:    |.:|        :|....:..
plant   419 -FK---------EG-----KDIMKDVMALPSDDSEDDDYDPDAPTCDD--------DKESSNSDC 460

  Fly   744 KADKHD-ELPLKPDLADDNAND---GDPGKLPAPI--PPLLD---------ANSSRKRKAFRL-- 791
            .:|..| |...|.|..:..|.|   .|||:..:.:  ..:|:         |..||:|...||  
plant   461 TSDTEDLETSFKGDETNQQAEDTPLEDPGRQTSQLQGDAILESDVGLDDGPAGVSRRRNVERLDY 525

  Fly   792 SKRYDNSRNHCDLSS--------------DENSSSSRGTSSLDLIIPPPVNFLGRNNPFLMATPK 842
            .|.||...::...||              :::.|...|.:   :.:....|.....:..|:...|
plant   526 KKLYDEEYDNVPTSSSDDDDWDKTARMGKEDSESEDEGDT---VPLKQSSNAEDHTSKKLIRKSK 587

  Fly   843 KASQGRSISV-GTGVGVNGIINSIFKLKGTSKEQ--PRMVR 880
            :|.:..::.: ..|.|.||....|.|...::.:|  |:..|
plant   588 RADKKDTLEMPQEGPGENGGSGEIEKSSSSACKQTDPKTQR 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PclNP_001261067.1 TUDOR 350..399 CDD:197660
PHD_SF 426..469 CDD:304600
PHD2_MTF2_PHF19_like 514..565 CDD:276978 14/56 (25%)
Mtf2_C 985..1032 CDD:290768
HAT3.1NP_001326497.1 PHD_PRHA_like 267..319 CDD:276979 13/51 (25%)
COG5576 576..695 CDD:227863 12/53 (23%)
homeodomain 622..666 CDD:238039 2/7 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12628
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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