DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcl and mtf2

DIOPT Version :9

Sequence 1:NP_001261067.1 Gene:Pcl / 37069 FlyBaseID:FBgn0003044 Length:1043 Species:Drosophila melanogaster
Sequence 2:NP_001038729.1 Gene:mtf2 / 692292 ZFINID:ZDB-GENE-060512-94 Length:605 Species:Danio rerio


Alignment Length:720 Identity:195/720 - (27%)
Similarity:298/720 - (41%) Gaps:203/720 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 EDVFIKCNDGRFYLGTI--IDQTSDQYLIRFDDQSEQWCEPDKLRKLGGGSSITAGGGGASTTES 417
            :||..:.:||.||||||  ||:...:..:.|:|||:.|.    |.|     .|..|..|...   
Zfish    50 QDVLARWSDGLFYLGTISKIDKHKHRCFVIFEDQSKSWV----LWK-----DIQTGDSGGEM--- 102

  Fly   418 TNTSPSGPMCVACKRSDIE--DVVEICERCGRGYHRGCTVEIVTGSGI-----WSCKRCAKPMKM 475
                    :|..|:....|  :.:.||::||:|||:.|...::..|.|     |.|::|      
Zfish   103 --------LCSICQNESSEPPNEIVICDKCGQGYHQLCHAPVIDSSVIDSDDKWLCRQC------ 153

  Fly   476 QQPVSHKITKPAGICRQ-------------LPYHADKLSWDEKHRVNEEQIYCYCGKPGKFDHNM 527
               |....||..|..::             |||..::|.||:.|:.|.:|.|||||.||.:...|
Zfish   154 ---VFATTTKRGGALKKGPNAKALQEMKQSLPYALEELMWDQGHKTNIQQCYCYCGGPGDWYLKM 215

  Fly   528 LQCCKCRNWFHTQCMQNFKKKLLRGDMFFVFCCTVCNNGIEFVRRMQIEWVDVLHIALYNLRKHQ 592
            |||.||:.|||..|:|.|:|.:|.||.|::|.|:|||:|.|:.:|:.:.||||.|::||||....
Zfish   216 LQCNKCKQWFHEACIQCFQKPMLFGDRFYLFICSVCNSGPEYPKRLPLRWVDVAHLSLYNLSVIH 280

  Fly   593 HQKYHHLLNDIWPFILEQRHQLPICEKWRTLPETALMER---LKQTLKDYSDRFVCGREFKRAPA 654
            .:||.....::..:|.|...:|.:.|    |.||...||   :.:.|.:..|.|:.|:|.|:...
Zfish   281 KKKYFDSELELMTYINENWDRLQLGE----LAETPRAERYECILEALNNNLDMFMSGKEIKKKKH 341

  Fly   655 FYALRHSGPPHIPKVFLEPHEELSDELLEKRFKLMLMPEEPDEGANELPKRVPKDVYEFNTDEDD 719
            .:.||...|| .|:         |.|||..|        ||::.::|:..:..|           
Zfish   342 LFGLRIRFPP-APQ---------SSELLSDR--------EPEKASHEIKIKGRK----------- 377

  Fly   720 PVETSEDEIPIKQIIEKAKKQAAQKADKHD-----ELPLKPDLADDNANDGDPGKLPAPIPPLLD 779
               .::..:....:...|.|:..:|...|.     :|....:|...|     .||.|......||
Zfish   378 ---ATKPPLSSMPVTNGAVKKGKRKYHTHSLETLAKLRRSSELLAQN-----DGKFPTIDNNSLD 434

  Fly   780 ANSSRKRKAFRLSKRYDNSRNHCDLSSDENSSSSRGTSSLDLIIPPPVNFLGRNNPFLMATPKKA 844
            ..:|:..|    |:.:..|.:..|:.|...:|:|..||:                          
Zfish   435 LMASKSAK----SETFLPSSSTSDVESVGATSTSETTST-------------------------- 469

  Fly   845 SQGRSISVGTGVGVNGIINSIFKLKGTSKEQPRMVR-TIKRRLSAKDITIGPNQEVRRRRTRRLT 908
            :..|..|:|:..|..           |....|.:.: .|||               ||.|.||. 
Zfish   470 TLSRQSSLGSPSGPR-----------TGCFWPTITQPPIKR---------------RRGRPRRA- 507

  Fly   909 TAIEVISTTTINPIPSHYLPIYAKDLQPPAPPM-------GKPTHGRLLRQRPQKQSPSQSRRNS 966
                                     ||||.|.:       .:||...::.:      ||     :
Zfish   508 -------------------------LQPPNPEIPPASNTEPQPTTNNIIPE------PS-----A 536

  Fly   967 TSSTATSSSSNGIGAPGHSMLD-LKQSVNKYFGGAMNRIDAGEPFAIRAKRRMGNGQVQYLVEWG 1030
            ..|...||.....|...::.|: ||.|::.|||.| .|:..||.:.:.|:|...:|:|:|||||.
Zfish   537 LPSCLYSSMDIMQGLDPNTQLNHLKSSISTYFGAA-GRLACGEKYRVLARRITNDGKVEYLVEWE 600

  Fly  1031 GDTAT 1035
            |.||:
Zfish   601 GVTAS 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PclNP_001261067.1 TUDOR 350..399 CDD:197660 18/45 (40%)
PHD_SF 426..469 CDD:304600 15/49 (31%)
PHD2_MTF2_PHF19_like 514..565 CDD:276978 28/50 (56%)
Mtf2_C 985..1032 CDD:290768 20/47 (43%)
mtf2NP_001038729.1 TUDOR 44..95 CDD:197660 20/53 (38%)
PHD1_MTF2 103..155 CDD:277053 16/60 (27%)
PHD2_MTF2 202..253 CDD:277055 28/50 (56%)
Mtf2_C 556..601 CDD:290768 20/45 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583823
Domainoid 1 1.000 47 1.000 Domainoid score I12024
eggNOG 1 0.900 - - E1_KOG4323
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 238 1.000 Inparanoid score I3332
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001586
OrthoInspector 1 1.000 - - otm25418
orthoMCL 1 0.900 - - OOG6_109707
Panther 1 1.100 - - O PTHR12628
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1484
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.750

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