DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcl and PHF1

DIOPT Version :9

Sequence 1:NP_001261067.1 Gene:Pcl / 37069 FlyBaseID:FBgn0003044 Length:1043 Species:Drosophila melanogaster
Sequence 2:NP_077084.2 Gene:PHF1 / 5252 HGNCID:8919 Length:567 Species:Homo sapiens


Alignment Length:737 Identity:174/737 - (23%)
Similarity:256/737 - (34%) Gaps:231/737 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   335 PPPPAPPVAAPSPAVTYALQEDVFIKCNDGRFYLGTI--IDQTSDQYLIRFDDQSE---QWCEPD 394
            |..|| |.:.|.|.:...  :||..:..||..|||||  :|...:..|::|:|.|:   .|    
Human    18 PASPA-PTSGPRPRLWEG--QDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDDSQFLVLW---- 75

  Fly   395 KLRKLGGGSSITAGGGGASTTESTNTSPSG-P----MCVACKRSDIEDVVE-----ICERCGRGY 449
                                   .:.||:. |    :|..|:.   |.||.     .||:|...|
Human    76 -----------------------KDISPAALPGEELLCCVCRS---ETVVPGNRLVSCEKCRHAY 114

  Fly   450 HRGCTVEIVTGSG-----IWSCKRCAKPMKMQQ-------PVSHKITKPAGICRQLPYHADKLSW 502
            |:.|.|......|     .|.|::|...:..::       |.:..:   .|:...|||....|.|
Human   115 HQDCHVPRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAM---LGMKLSLPYGLKGLDW 176

  Fly   503 DEKHRVNEEQIYCYCGKPGKFDHNMLQCCKCRNWFHTQCMQNFKKKLLRGDMFFVFCCTVCNNGI 567
            |..|..|.:|.|||||.||:::..||||..|..|||..|.|...|.||.||.|:.|.|.||..|.
Human   177 DAGHLSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGGP 241

  Fly   568 EFVRRMQIEWVDVLHIALYNLRKHQHQKYHHLLNDIWPFILEQRHQLPICEKWRTLPETALMERL 632
            |.|||:|:.||||.|:.||:|.....:||.....:|.||..|....|.:.|...| |:.....||
Human   242 EKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDT-PKGERSSRL 305

  Fly   633 KQTLKDYSDRFVCGREFKRAPAFYALRHSGPPHIPKVFLEPHEELSDELLEKRFKLMLMPEEPDE 697
            ...|..:.|||:.|||.|:....:.|....||                           |.||..
Human   306 LSALNSHKDRFISGREIKKRKCLFGLHARMPP---------------------------PVEPPT 343

  Fly   698 GANELPK---------RVPKDVYEFNTDEDDPVETSE----DEIPIKQIIEKAKKQAAQKADKHD 749
            |...|..         .|.:.:.:....|.:|:...:    :|:.....:....:...|:...|.
Human   344 GDGALTSFPSGQGPGGGVSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHL 408

  Fly   750 ELPLKPDLADDNANDGDPGKLPAPIPPLLDANSSRKRKAFRLSKRYDNSRNHCDLSSDENSSSSR 814
            :..|:..::.           |:|.|                                  :.|.:
Human   409 QRALQASVSP-----------PSPSP----------------------------------NQSYQ 428

  Fly   815 GTSSLDLIIPPPVNFLGRNNPFLMATPKKASQGRSISVGTGVGVNGIINSIFKLKGTSKEQPRMV 879
            |:|.        .||...:...|.::|.:.......|..|.              |||.:.....
Human   429 GSSG--------YNFRPTDARCLPSSPIRMFASFHPSASTA--------------GTSGDSGPPD 471

  Fly   880 RTIKRRLSAKDITIGPNQEVRRRRTRRLTTAIEVISTTTINPIPSHYLPIYAKDLQPPAPPMGKP 944
            |      |..::.||...::.:.....:|.:...:|:      ||..||                
Human   472 R------SPLELHIGFPTDIPKSAPHSMTASSSSVSS------PSPGLP---------------- 508

  Fly   945 THGRLLRQRPQKQSPSQSRRNSTSSTATSSSSNGIGAPGHSMLDLKQSVNKYFGGAMNRIDAGEP 1009
                              ||::..|....|.|.|.|..              ..|.:..:..|:|
Human   509 ------------------RRSAPPSPLCRSLSPGTGGG--------------VRGGVGYLSRGDP 541

  Fly  1010 FAIRAKRRMGNGQVQYLVEWGG 1031
            ..:.|:|...:|.|||||||||
Human   542 VRVLARRVRPDGSVQYLVEWGG 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PclNP_001261067.1 TUDOR 350..399 CDD:197660 15/53 (28%)
PHD_SF 426..469 CDD:304600 15/52 (29%)
PHD2_MTF2_PHF19_like 514..565 CDD:276978 27/50 (54%)
Mtf2_C 985..1032 CDD:290768 15/47 (32%)
PHF1NP_077084.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 6/13 (46%)
Tudor_2 34..69 CDD:375553 13/36 (36%)
PHD1_PHF1 89..139 CDD:276975 15/52 (29%)
PHD2_PHF1 188..239 CDD:277057 27/50 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 333..441 22/187 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 455..537 23/155 (15%)
Mtf2_C <539..565 CDD:372898 14/25 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149689
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4323
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 241 1.000 Inparanoid score I3343
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001586
OrthoInspector 1 1.000 - - otm41475
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12628
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6663
SonicParanoid 1 1.000 - - X1484
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.880

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