DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pcl and Bach1

DIOPT Version :9

Sequence 1:NP_001261067.1 Gene:Pcl / 37069 FlyBaseID:FBgn0003044 Length:1043 Species:Drosophila melanogaster
Sequence 2:NP_031546.1 Gene:Bach1 / 12013 MGIID:894680 Length:739 Species:Mus musculus


Alignment Length:567 Identity:111/567 - (19%)
Similarity:172/567 - (30%) Gaps:162/567 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 SLSSSLTTAQQPSPIIPAIQHKAILPLIDSSTADSSSCSSSSVSSSSYSGTATTSAAVVIVDEPD 272
            ::.|..|..|.|||..||.|.:. .||...|.......|.|::.:...||....:..       .
Mouse   286 AMESEDTEGQDPSPQCPAEQPQG-TPLPQDSAGPHGLYSLSALHTYEQSGDVAFAGV-------Q 342

  Fly   273 STTTTPQTPPTTPEAM-------------SSPGKSSPSPPLLA----------TQSLLKGVNSMK 314
            |.|...:.|.:.|:|.             ||.|....|..|.:          .:.|.||..|..
Mouse   343 SKTVKTEKPLSRPDAQDEKPSENQDLYLKSSMGPKEDSSSLASEDRSSVEREVAEHLAKGFWSDI 407

  Fly   315 PSFKTVEAAPPTPPTPPSPPPPPPAPPVAAPSPAVTYALQEDVFIKCNDGRFYLGTIIDQTSDQY 379
            .|             ..||.....:|.||...|...|:.:..   :|.    :||..|.::.:..
Mouse   408 CS-------------TDSPCQMQLSPTVAKDGPEQGYSQRRS---ECP----WLGIRISESPEPG 452

  Fly   380 LIRFDDQSEQWCEP--DKLRKLGGGSSITAGGGGASTTESTNTSPSGPMCVACKRSDIE-DVVEI 441
            ...|...|...| |  ..|...|..|::..  |...........|....||.....|.| |....
Mouse   453 QRTFTTLSSVNC-PFISTLSSEGCSSNLEI--GNYDYVSEPQQEPCPYACVISLGDDSETDTEGD 514

  Fly   442 CERCGRGYHRGCTVEIVTGSGIWSCKRCAKPMKMQQPVSHKITKPAGICRQLPYHADKLSWDEKH 506
            .|.|. ...:.|.|::              |...|:.:|        :.|.     |..|..:.|
Mouse   515 SESCS-AREQDCEVKL--------------PFNAQRIIS--------LSRN-----DFQSLLKMH 551

  Fly   507 RVNEEQIYCYCGKPGKFDH-------NMLQCCKCRNWFHTQCMQNFKKKLLRGDMFFVFCCTVCN 564
            ::..||:.|.        |       |.:...:||. ....|:||.:.:                
Mouse   552 KLTPEQLDCI--------HDIRRRSKNRIAAQRCRK-RKLDCIQNLESE---------------- 591

  Fly   565 NGIEFVRRMQIEWVDVLHIALYNLRKHQHQKYHHLLNDIWPFILEQRHQLP-ICEKWRTLPETAL 628
                 :.::|.|...:|            ::..|:|:.:.    |.:..|. :|:  :...|.||
Mouse   592 -----IEKLQSEKESLL------------KERDHILSTLG----ETKQNLTGLCQ--QVCKEAAL 633

  Fly   629 MERLKQTLKDYSD-----RFVCGREFKRAP----AFYALRHSG--PPHIPKVFLEPHEELSDELL 682
            .....|.|..||.     .|:...:.|..|    ||.::....  ||..|..........|.||:
Mouse   634 SPEQIQILAKYSASDCPLSFLISEKGKSTPDGELAFTSVFSVSDVPPTAPPPCGRGSSAASQELV 698

  Fly   683 EKRFKLMLMP----EEPDEGANELPKRVPKDVYEFNTDEDDPVETSE 725
            ::      .|    ..|::.....|.|....:.:|.....|...|.|
Mouse   699 QE------SPPTTAAAPEQATLLEPCRQSAGISDFCQQMSDKCTTDE 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PclNP_001261067.1 TUDOR 350..399 CDD:197660 10/50 (20%)
PHD_SF 426..469 CDD:304600 9/43 (21%)
PHD2_MTF2_PHF19_like 514..565 CDD:276978 8/57 (14%)
Mtf2_C 985..1032 CDD:290768
Bach1NP_031546.1 BTB_POZ_BACH1 7..126 CDD:349586
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 287..321 12/34 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..391 9/46 (20%)
bZIP_BACH 554..624 CDD:269867 17/115 (15%)
coiled coil 558..620 CDD:269867 14/107 (13%)
Basic motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 565..581 3/16 (19%)
Leucine-zipper. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 585..592 2/27 (7%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 679..708 7/34 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

Return to query results.
Submit another query.