DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sema5c and adamts2a

DIOPT Version :10

Sequence 1:NP_611293.3 Gene:Sema5c / 37066 FlyBaseID:FBgn0284221 Length:1093 Species:Drosophila melanogaster
Sequence 2:XP_700384.4 Gene:adamts2a / 571682 ZFINID:ZDB-GENE-070816-3 Length:1295 Species:Danio rerio


Alignment Length:1232 Identity:231/1232 - (18%)
Similarity:348/1232 - (28%) Gaps:513/1232 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 QANSTSLLQSNGQLFVGTATDFSGSDVAI---------LRTGVESNKRFLRTKQYNNNWLSGAQF 235
            |.:|..||.|: .|:||..|:...:.|||         :|.|.|  :.|:...:      .|...
Zfish   124 QTHSEPLLPSD-CLYVGYVTNVQDTSVAISNCDGLAGMIRAGQE--EFFIEPLE------RGGDM 179

  Fly   236 VGSFEAG----HFVYFLLRESAAEHMSCGKVIYSRVARVCKNDVGGGGQLLRDNWTSFLKARLNC 296
            .|..|.|    |.||   |.|..:     |...::.|.........||....:.....:|.::|.
Zfish   180 TGEEEGGPGRHHIVY---RSSDIK-----KPAVNQPADFHPRGSPLGGLAALEFLPQHVKKKINS 236

  Fly   297 SLPGEYPYYFDEIQGMTYAESESILYATFRTSGSSIFGSAVCAYNLSSINAAFDGPFKQQEHSDA 361
            ....|  .|.|||..:............|...      ..:..|.|:.:|..      .:.:.|:
Zfish   237 RARRE--TYEDEIFNIEVLLGVDCSVVMFHGR------EHIQKYLLTLMNIV------NEIYQDS 287

  Fly   362 AWKTVNTN-----QRSQFQCGTSSIG--------HWLES-SRYQLMDEAVQPIGAEPLYHSKL-- 410
               |:..:     .|....|.:.|:|        ..||: .|:..:.:......||  ||...  
Zfish   288 ---TLGAHINVVLVRIMMLCSSKSMGLIELGNASQSLENVCRWAFLQQKEDKNDAE--YHDHAIF 347

  Fly   411 ---EQFGRLALDIINTKTEQVH---------------VLFVASSGNHIKKLSVKYDGDGVQTCLV 457
               ::||...:......|...|               ...||....|:  |.:::||        
Zfish   348 LTRQEFGPTGMQGYAPVTGMCHPVRSCTLNHEDGFSSAFVVAHETGHV--LGMEHDG-------- 402

  Fly   458 ELWQADDTGTSSLLNMAYLKVSDSLYLGTDLA-----------LTRIPAQHCSRHVSQSSCLNSM 511
               ||::.|             |.:.:|:.:|           .:|...|...|:::...||.. 
Zfish   403 ---QANECG-------------DEVPMGSIMAPLVQAAFHRFHWSRCSQQELRRYLNTYDCLRD- 450

  Fly   512 DPYCGWNELVERCMPQPQDSSVLQH-WHQAPQITCPVLNAPID--------------GGWSTWSP 561
            ||:                    .| |...||:  |.|...:|              ..:||:.|
Zfish   451 DPF--------------------DHEWPTLPQL--PGLQYSMDEQCRFDFGMGYMMCTAYSTYDP 493

  Fly   562 WAVCQQHEQPDSNCQCRQRSCNNPQPQHGGATCEGISTQVTNCTQHGGWTEWSAWSPCSQTCGIA 626
                           |:|..|::|:......|.:|.....|.|.                     
Zfish   494 ---------------CKQLWCSHPENPFFCKTKKGPPIDGTKCA--------------------- 522

  Fly   627 VKIRRRTCGNPRPAFGGRTCVGSEQSEMYCRHLPPCPVAKPQSVDGGWGPWGEWSECSAQCGGGF 691
                           .|:.|.     :.:|..|.|..:    .:||.||.|.::..||..||||.
Zfish   523 ---------------SGKNCF-----KGHCIKLTPDIL----RLDGHWGQWTKFGSCSRTCGGGV 563

  Fly   692 RMRRRECNDPAPLNGGMECPGCRLDYEECNMQSCQEV------RKLSAWTP----------WLTV 740
            |.|.||||:|.|.|||..|.|...:::.||.:.|.|.      .:...|.|          ||..
Zfish   564 RFRTRECNNPVPANGGRTCYGNNYEFQLCNTEECAEALVDFREEQCKMWDPHFEHEGNKHHWLPY 628

  Fly   741 TGSGNSSEPHMERRFRFVC-------------------RATSPDPSSV-------RIG------- 772
                ..|||  :.|.:..|                   |.:..||.||       ::|       
Zfish   629 ----EHSEP--DERCQLYCQSKETGDVVSMKRMVHDGTRCSYKDPYSVCVRGECEKVGCDNVIAS 687

  Fly   773 -LPKEESRNCHADGS-CQ--------------------------------------------RQV 791
             |..::...|..|.| |:                                            :..
Zfish   688 ELEDDKCGVCGGDNSTCKIVKGNFTRSTRKPGFLKILEIPRGARHIQIHEFKGTPHILAVKNQAT 752

  Fly   792 DH----DSAD------------------SDAAD-------------------------------- 802
            ||    |..|                  :|..:                                
Zfish   753 DHLFLNDEGDFPESRTVIEKGVAWEYTNNDDMETVQTTGPLRYGVLIMVQSHSISKVTISYKYIL 817

  Fly   803 --------------------------WSPCSVSCGGGVQQRHRG--RGSQSRVCNIHAC---PAE 836
                                      ||.||..||||.|....|  |.|..::.:...|   |..
Zfish   818 PEDPLSSMENTLPQDDTIYFEWALRKWSHCSKPCGGGKQYTRFGCRRKSDGKMVHRTLCANIPKP 882

  Fly   837 EQLSSNSLDNELEHGEWGCWSEWSACSVTCG-LGLRRRTRRC----LAGHDRLCQGRALEEQKCE 896
            ..:|......|.....| ...||..||.:|| .|.:.|..||    |.|..:....:...:.:.|
Zfish   883 RAISRACNQKECSEPIW-VTGEWEECSKSCGKTGSQTRPVRCVRPELDGSYKAINAKYCNDDRPE 946

  Fly   897 -MVPCEDFLGWSAW--SEWSSCS---SDGIRLRH---------------------RRCL------ 928
             ..||...|..:.|  ..||.||   .:|.:.|.                     |.||      
Zfish   947 GRRPCNRQLCPAHWRTGPWSQCSVSCGNGTQERQVMCSTPDNAIGICMDTKPQSVRSCLPAPCPN 1011

  Fly   929 --------------VEQPG----------------------SMECRGAEFEKTACVPNECEETQ- 956
                          .|.|.                      ||.|....:.:..|  ..|.||. 
Zfish  1012 DRGNFLIQWLSRADPEFPAPKISSRSRCKGDKSVFCRMEVLSMYCSNPGYRQMCC--KSCSETNY 1074

  Fly   957 ----------TASTATLP-IVIFVGLLFTVACCLAT------YRFTKKRFMLSAEEALNKTTT-- 1002
                      |.:|||.| ..|...|||..:...:|      .|:|......:..:.|.:|||  
Zfish  1075 TSQFNLTRPWTYTTATPPKTPIRTTLLFRTSQKPSTTTTPSISRWTDISPTSATTKTLKQTTTIT 1139

  Fly  1003 -TTASFDTYPNQYSSLPTKDYYDQRPKRQSSFRMPAKTSNLGNGNGT--LNRNNMHQNNTPK 1061
             ||.:|..:|         |.:|...:...||......|::.....:  ::.::...:.||:
Zfish  1140 FTTGAFTKHP---------DSFDYEEESSGSFYEDETWSSVSESESSEFISSSSKPWSTTPQ 1192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sema5cNP_611293.3 Sema_5C 65..496 CDD:200526 70/373 (19%)
PSI 497..546 CDD:396154 9/49 (18%)
TSP1 556..607 CDD:214559 11/50 (22%)
TSP1 610..663 CDD:214559 5/52 (10%)
TSP1 674..725 CDD:214559 24/50 (48%)
TSP1 802..834 CDD:214559 13/94 (14%)
TSP1 853..901 CDD:214559 15/53 (28%)
TSP1 906..953 CDD:214559 16/114 (14%)
adamts2aXP_700384.4 None

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