Sequence 1: | NP_611293.3 | Gene: | Sema5c / 37066 | FlyBaseID: | FBgn0284221 | Length: | 1093 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_016859882.1 | Gene: | SEMA4C / 54910 | HGNCID: | 10731 | Length: | 875 | Species: | Homo sapiens |
Alignment Length: | 657 | Identity: | 181/657 - (27%) |
---|---|---|---|
Similarity: | 267/657 - (40%) | Gaps: | 115/657 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 53 ISYQDLMSTAKRFYDPETTWYSEMLFDVARNQVIVGARDTLYRMSFDLEPLE---RASWGATPSE 114
Fly 115 IAMCQAKGQSERW-CRNYVRVLHSYGENQLYACGTNAFQPSCSWRQMENLTVT--GVDSGVVKCP 176
Fly 177 FHPQANSTSLLQSNGQLFVGTATDFSGSDVAILRT-GVESNKRFLRTKQYNNNWLSGAQFVGSF- 239
Fly 240 ---EAGHF------VYFLLRESAAEHMSCGKVIYSRVARVCKNDVGGGGQLLRDNWTSFLKARLN 295
Fly 296 CSLPGEYPYYFDEIQGMTYAESES----ILYATFRTSGSSIFGSAVCAYNLSSINAAFDGPFKQQ 356
Fly 357 EHSDAAWKTVNTNQRSQFQCGTSSIGHW---------LE--------SSRYQLMDEAVQPIGAEP 404
Fly 405 LYHSKLEQFGRLALDIIN-----TKTEQVHVLFVAS-SGNHIKKLSVKYDGDGVQTCLVELWQAD 463
Fly 464 DTGTSSLLNMAYLKVSDS---LYLGTDLALTRIPAQHCSRHVSQSSCLNSMDPYCGWNELVERCM 525
Fly 526 P--QPQDSSVLQHWHQAPQITCPVLNAPIDGGWSTWSPWAVCQQHEQPDSNCQCRQRSCNNPQPQ 588
Fly 589 HGGATCEGISTQVTNC-----TQHGGWTEWSAWSPCSQTCGIAVKIRRRT----CGNPRPAFGGR 644
Fly 645 TCVGSEQ 651 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema5c | NP_611293.3 | Sema_5C | 65..496 | CDD:200526 | 144/477 (30%) |
PSI | 497..546 | CDD:279745 | 13/50 (26%) | ||
TSP1 | 556..607 | CDD:214559 | 7/55 (13%) | ||
TSP1 | 610..663 | CDD:214559 | 12/46 (26%) | ||
TSP1 | 674..725 | CDD:214559 | |||
TSP1 | 802..834 | CDD:214559 | |||
TSP1 | 853..901 | CDD:214559 | |||
TSP1 | 906..953 | CDD:214559 | |||
SEMA4C | XP_016859882.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |