Sequence 1: | NP_611293.3 | Gene: | Sema5c / 37066 | FlyBaseID: | FBgn0284221 | Length: | 1093 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005167089.1 | Gene: | sema3gb / 544660 | ZFINID: | ZDB-GENE-050513-4 | Length: | 746 | Species: | Danio rerio |
Alignment Length: | 652 | Identity: | 187/652 - (28%) |
---|---|---|---|
Similarity: | 301/652 - (46%) | Gaps: | 109/652 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 LLLILSLLTLEGPQPSTGSGYTTKSSVDLLENDSRYISYQDLM--STAKRF-YDPETTWYSEMLF 78
Fly 79 DVARNQVIVGARDTLYRMSFDLEPLER----ASWGATPSEIAMCQAK---GQSERWCRNYVRVLH 136
Fly 137 SYGENQLYACGTNAFQPSCS-----WRQMENL--TVTG-VDSGVVKCPFHP-QANSTSLLQSNGQ 192
Fly 193 LFVGTATDFSGSDVAILRTGVESNKRFLRTKQYNNNWLSGAQFV-------GSFEAGHFVYFLLR 250
Fly 251 ESAAEHMSCGKV--IYSRVARVCKNDVGGGGQLLRDNWTSFLKARLNCSLPGE--YPYYFDEIQG 311
Fly 312 M----TYAESESILYATFRTSGSSIFGSAVCAYNLSSINAAFDGPFKQQEHSDAAWKTVNTNQRS 372
Fly 373 QFQCGTSSIGHW---LESSRYQLMDEAVQPIGAEPLYHSKL---------------EQFGRLALD 419
Fly 420 IINTKTEQVHVLFVASSGNHIKKLSV-KYDGDGVQTCLVELWQADDTGTSSLLNMAYLKVS---D 480
Fly 481 SLYLGTDLALTRIPAQHCSRH-VSQSSCLNSMDPYCGWNELVERC---MPQPQDSSVLQH-WHQA 540
Fly 541 PQITCPVLNAPID-----------GGWSTW------SPWAVCQQHEQPDSNCQCRQRSCNNPQPQ 588
Fly 589 HG 590 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema5c | NP_611293.3 | Sema_5C | 65..496 | CDD:200526 | 147/484 (30%) |
PSI | 497..546 | CDD:279745 | 15/53 (28%) | ||
TSP1 | 556..607 | CDD:214559 | 10/41 (24%) | ||
TSP1 | 610..663 | CDD:214559 | |||
TSP1 | 674..725 | CDD:214559 | |||
TSP1 | 802..834 | CDD:214559 | |||
TSP1 | 853..901 | CDD:214559 | |||
TSP1 | 906..953 | CDD:214559 | |||
sema3gb | XP_005167089.1 | Sema_3F | 42..513 | CDD:200515 | 147/486 (30%) |
PSI | 512..558 | CDD:214655 | 14/47 (30%) | ||
Ig_Semaphorin_classIII | 576..662 | CDD:143279 | 11/50 (22%) | ||
IG_like | 581..651 | CDD:214653 | 11/45 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |