Protein Alignment Sema5c and Adgrb1

DIOPT Version :10

• Sequence 1: NP_611293.3
• Gene: Sema5c / 37066
• FlyBaseID: FBgn0284221
• Length: 1093
• Species: Drosophila melanogaster
• Sequence 2: XP_063119927.1
• Gene: Adgrb1 / 362931
• RGDID: 1305608
• Length: 1615
• Species: Rattus norvegicus
• Alignment Length: 595
• Identity: 140/595 - (23%)
• Similarity: 194/595 - (32%)
• Gaps: 220/595 - (36%)

  Fly   475 YLKVSDSLYLGTDLALTRIPAQHCS-----RHVSQSSCLNSMDPYCG---WNELVERCMPQ---- 527
            |:||:            :.||. ||     |.....|.|.|...|.|   ::|::..|.|.
  Rat    83 YMKVA------------KAPAP-CSGPGRVRTYQFDSFLESTRTYLGVESFDEVLRLCDPSAPLA 134

  Fly   528 ----------------PQDSSV----------LQHW--------HQAPQITCPVLNAPIDGGWST 558
                            |||..:          :::.        |.|.|:.|..|:|.:.|..|:
  Rat   135 FLQASKQFLQMQRQQPPQDGDLGPQGSGDDFSVEYLVVGNRNPSHAACQMLCRWLDACLAGSRSS 199

  Fly   559 WSPWAVCQQHEQPDSNCQC----RQRSCNNPQPQHGGATC--EGISTQVTNC----TQH------ 607
             .|..:.|      :.|.|    ...:.::|....|. .|  :|::....||    ||.
  Rat   200 -HPCGIMQ------TPCACLGGEAGDTASSPLVPRGD-VCLRDGVAGGPENCLTSLTQDRGGHGS 256

  Fly   608 -GGWTEWSAWSPCSQTCGIAVKIRRRTCGNPRPAFG--GRTCVGSEQSEMYCRHLPPCPVAK--- 666
             |||..||.|..|::.||..::.|.|||.   |..|  ||.|.|..:....|......|..:
  Rat   257 AGGWKLWSLWGECTRDCGGGLQTRTRTCS---PTLGVEGRGCEGVLEEGRLCNRKACGPTGRTSS 318

  Fly   667 ---------------------------PQSVDGGWGPWGEWSECSAQCGGGFRMRRRECNDPAPL 704
                                       ||:.|.....|..||.||:.||.|::.|.|.|   ...
  Rat   319 RSQSLRSTDARRREEFGDELQQFGFPSPQTGDPAAEEWSPWSVCSSTCGEGWQTRTRFC---VSS 380

  Fly   705 NGGMECPGCRLDYEECNMQSCQEVRKLSAWTPWLTVTGSGNSSEPHMERRFRFVCRATSPDPSSV 769
            :...:|.|...:...||..:...|.  .||..|                         ||
  Rat   381 SYSTQCSGPLREQRLCNNSAVCPVH--GAWDEW-------------------------SP----- 413

  Fly   770 RIGLPKEESRNCHADGSCQRQVDHDSADSDAADWSPCSVSCGGGVQQRHR-------------GR 821
                                             ||.||.:||.|.:.|.|             |.
  Rat   414 ---------------------------------WSLCSSTCGRGFRDRTRTCRPPQFGGNPCEGP 445

  Fly   822 GSQSRVCNIHACPAEEQLSSNSLDNELEHGEWGCWSEWSACSVTCGLGLRRRTRRC----LAGHD 882
            ..|::.|||..||      ..::|     |.|..||.||.||.:|..|.::|||.|    ..|.:
  Rat   446 EKQTKFCNIALCP------GRAVD-----GNWNEWSSWSTCSASCSQGRQQRTRECNGPSYGGAE 499

  Fly   883 RLCQGRALEEQKCEMVPCEDFLGWSAWSEWSSCS---SDGIRLRHRRCLVEQPGSMECRGAEFEK 944
              |||..:|.:.|.:..|.....|.||:.|.|||   ..|.:.|.|.|.....|...|:|.:.|.
  Rat   500 --CQGHWVETRDCFLQQCPVDGKWQAWASWGSCSVTCGGGSQRRERVCSGPFFGGAACQGPQDEY 562

  Fly   945 TACVPNECEE 954
            ..|....|.|
  Rat   563 RQCGAQRCPE 572

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sema5c	NP_611293.3	Sema_5C	65..496	CDD:200526	4/20 (20%)
		PSI	497..546	CDD:396154	17/94 (18%)
		TSP1	556..607	CDD:214559	12/60 (20%)
		TSP1	610..663	CDD:214559	18/54 (33%)
		TSP1	674..725	CDD:214559	15/50 (30%)
		TSP1	802..834	CDD:214559	14/44 (32%)
		TSP1	853..901	CDD:214559	19/51 (37%)
		TSP1	906..953	CDD:214559	16/49 (33%)
Adgrb1	XP_063119927.1	None