Sequence 1: | NP_611293.3 | Gene: | Sema5c / 37066 | FlyBaseID: | FBgn0284221 | Length: | 1093 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_059004.1 | Gene: | Sema6c / 29744 | RGDID: | 3659 | Length: | 960 | Species: | Rattus norvegicus |
Alignment Length: | 912 | Identity: | 244/912 - (26%) |
---|---|---|---|
Similarity: | 359/912 - (39%) | Gaps: | 249/912 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 LWLLLILSLLTLEGPQPSTGSGYTTKSSVDLLENDSRYISYQDLMSTAKRFYDPETTWY------ 73
Fly 74 ---SEMLFDVAR-----NQVIVGARDTLYRMSFDLEPLERASWGATPS--------EIAMCQAKG 122
Fly 123 QSERWCRNYVRVLHSYGENQLYACGTNAFQPSCSWRQMENLTVTGVD-SGVVKCPFHPQANSTSL 186
Fly 187 LQSNGQLFVGTATDFSGSDVAILRT-GVESNKRFLRTKQYNNNWLSGAQFVGSFEAGHFVYFLLR 250
Fly 251 ESAAEHMSCGKVIYSRVARVCKNDVGGGGQLLRDNWTSFLKARLNCSLPGEYPYYFDEIQGMT-- 313
Fly 314 -YAESESILYATFRTSGSSIFGSAVCAYNLSSINAAFDGPFKQQEHSDAAWKTVNTNQRSQFQCG 377
Fly 378 T-SSIG--HWLESSR------------YQLMDEAVQPIGAEPLY----HSKLEQFGRLALDIINT 423
Fly 424 KTEQVHVLFVASS-GNHIKKLSVKYDGDGVQTCLVELWQADDTGTSS----------LLNMAYLK 477
Fly 478 VSDSLYLGTDLALTRIPAQHCSRH-VSQSSCLNSMDPYCGWNELVERCM----PQPQDSSV---- 533
Fly 534 --LQHW---------HQAPQITCPVLNAPIDGGWSTWSPWAVCQQHEQPDSNCQCRQRSCNNPQP 587
Fly 588 QHGGATCEGISTQVTNCTQHGGWTEWSAWSPCSQTCGIAVKI----------------------- 629
Fly 630 -----RRR-----TCGNPRP--------AFGG--------RTCVGSEQSEMYCRHLPP------- 661
Fly 662 ---C---PVAKPQ----SVDGGWGPWGEWSE--------------CSAQCGGGFRMRRRECNDPA 702
Fly 703 PLNGGMECPGCRLDYEECNMQSCQE-VRKLSAWTPWLTVTGSGNSSEPHMERRFRFVCRATSPDP 766
Fly 767 SS 768 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema5c | NP_611293.3 | Sema_5C | 65..496 | CDD:200526 | 148/487 (30%) |
PSI | 497..546 | CDD:279745 | 19/68 (28%) | ||
TSP1 | 556..607 | CDD:214559 | 8/50 (16%) | ||
TSP1 | 610..663 | CDD:214559 | 19/114 (17%) | ||
TSP1 | 674..725 | CDD:214559 | 17/64 (27%) | ||
TSP1 | 802..834 | CDD:214559 | |||
TSP1 | 853..901 | CDD:214559 | |||
TSP1 | 906..953 | CDD:214559 | |||
Sema6c | NP_059004.1 | Sema | 52..516 | CDD:417757 | 147/473 (31%) |
PSI | 517..>538 | CDD:396154 | 12/20 (60%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 555..624 | 14/100 (14%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 685..725 | 6/39 (15%) | |||
PHA03307 | 730..>956 | CDD:223039 | 31/127 (24%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 745..792 | 16/60 (27%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 806..960 | 9/37 (24%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |