Sequence 1: | NP_611293.3 | Gene: | Sema5c / 37066 | FlyBaseID: | FBgn0284221 | Length: | 1093 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001094352.1 | Gene: | Sema3g / 290562 | RGDID: | 1306079 | Length: | 780 | Species: | Rattus norvegicus |
Alignment Length: | 573 | Identity: | 154/573 - (26%) |
---|---|---|---|
Similarity: | 244/573 - (42%) | Gaps: | 105/573 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 WLL--LILSLLTLEG---PQPSTGSGYTTKSSVDLLENDSRYISYQDLMSTAKR--FYDPETTWY 73
Fly 74 SEMLF-DVARNQVIVGARDTLYRMSFDL---EPLERASWGATPSEIAMCQAKGQSE-RWCRNYVR 133
Fly 134 VLHSYGENQLYACGTNAFQPSCSW-------RQMENLTVTGVDSGVVKCPFHPQANSTSLLQSNG 191
Fly 192 QLFVGTATDFSGSDVAILRTGVESNKRFLRTKQYNNNWLSGAQFV-------GSFEAGHFVYFLL 249
Fly 250 RESA-AEHMSCGKVIYSRVARVCKNDVGGGGQLLRDNWTSFLKARLNCSLPGE--YPYYFDEIQG 311
Fly 312 M----TYAESESILYATFRTSGSSIFGSAVCAYNLSSINAAFDGPFKQQEHSDAAWKTVNTNQRS 372
Fly 373 QFQCG------------------TSSIGHWLESSRYQLMDEAVQPIGAEPLYHSKL--------- 410
Fly 411 ------EQFGRLALDIINTKTEQVHVLFVASSGNHIKKLSVKYDGDGV---QTCLVELWQADDTG 466
Fly 467 TSSLLNMAYLKVSDSLYLGTDLALTRIPAQHCSRHVSQ-SSCLNSMDPYCGWN 518 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema5c | NP_611293.3 | Sema_5C | 65..496 | CDD:200526 | 128/492 (26%) |
PSI | 497..546 | CDD:279745 | 8/23 (35%) | ||
TSP1 | 556..607 | CDD:214559 | |||
TSP1 | 610..663 | CDD:214559 | |||
TSP1 | 674..725 | CDD:214559 | |||
TSP1 | 802..834 | CDD:214559 | |||
TSP1 | 853..901 | CDD:214559 | |||
TSP1 | 906..953 | CDD:214559 | |||
Sema3g | NP_001094352.1 | Sema | 50..523 | CDD:301699 | 128/494 (26%) |
PSI | 522..568 | CDD:214655 | 8/23 (35%) | ||
Ig_Semaphorin_classIII | 591..676 | CDD:143279 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |