Sequence 1: | NP_611293.3 | Gene: | Sema5c / 37066 | FlyBaseID: | FBgn0284221 | Length: | 1093 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001098103.1 | Gene: | Sema3d / 246262 | RGDID: | 727939 | Length: | 777 | Species: | Rattus norvegicus |
Alignment Length: | 553 | Identity: | 162/553 - (29%) |
---|---|---|---|
Similarity: | 281/553 - (50%) | Gaps: | 71/553 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 LLLILSLLTLEGPQPSTGSGYTTKSSVDLLENDSRYISYQDLM--STAKRFY-DPETTWYSEMLF 78
Fly 79 DVARNQVIVGARDTLYRMSF-DL-EPLERASWGATPSEIAMCQAKGQ-SERWCRNYVRVLHSYGE 140
Fly 141 NQLYACGTNAFQPSCSWRQME--------NLTVTGVDSGVVKCPFHPQANSTSLLQSNGQLFVGT 197
Fly 198 ATDFSGSDVAILRT-GVESNKRFLRTKQYNNNWLSGAQFVGSFEA-------GHFVYFLLRESAA 254
Fly 255 EHMSCGKVIYSRVARVCKNDVGGGGQLLRDNWTSFLKARLNCSLPGE--YPYYFDEIQGM----T 313
Fly 314 YAESESILYATFRTSGSSIFGSAVCAYNLSSINAAFDGPFKQQEHSDAAWKTVNTNQRSQF---- 374
Fly 375 QCGTSSIGHWLESS------------RYQLMDEAVQPIGAEPLYHS-----KLEQFGRLALDIIN 422
Fly 423 TKTEQVHVLFVASS-GNHIKKLSVKYDGDGVQTCLVELWQADDTGTSSLLNMAYLKVSDSLYLGT 486
Fly 487 DLALTRIPAQHCSRH-VSQSSCLNSMDPYCGWN 518 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema5c | NP_611293.3 | Sema_5C | 65..496 | CDD:200526 | 142/478 (30%) |
PSI | 497..546 | CDD:279745 | 7/23 (30%) | ||
TSP1 | 556..607 | CDD:214559 | |||
TSP1 | 610..663 | CDD:214559 | |||
TSP1 | 674..725 | CDD:214559 | |||
TSP1 | 802..834 | CDD:214559 | |||
TSP1 | 853..901 | CDD:214559 | |||
TSP1 | 906..953 | CDD:214559 | |||
Sema3d | NP_001098103.1 | Sema_3D | 61..534 | CDD:200513 | 142/480 (30%) |
PSI | 533..570 | CDD:214655 | 7/23 (30%) | ||
Ig_Sema3 | 595..686 | CDD:409455 | |||
Ig strand B | 609..613 | CDD:409455 | |||
Ig strand C | 621..625 | CDD:409455 | |||
Ig strand E | 648..652 | CDD:409455 | |||
Ig strand F | 662..667 | CDD:409455 | |||
Ig strand G | 679..682 | CDD:409455 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |