| Sequence 1: | NP_611293.3 | Gene: | Sema5c / 37066 | FlyBaseID: | FBgn0284221 | Length: | 1093 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_017177063.1 | Gene: | Sspo / 243369 | MGIID: | 2674311 | Length: | 5197 | Species: | Mus musculus |
| Alignment Length: | 916 | Identity: | 183/916 - (19%) |
|---|---|---|---|
| Similarity: | 249/916 - (27%) | Gaps: | 440/916 - (48%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 448 DGDGVQTCL-VELWQADDTGTSSLLNMAYLKVSDSLYLGTDLALTRIPAQH-------CSRHVSQ 504
Fly 505 SSCLNS-MDPYCGWNELVERC-------------MPQPQDSSVLQHWHQAPQITCPVLNAPIDGG 555
Fly 556 WSTWSPWAVCQQHEQPDSNC----QCRQRSCNNPQPQHGGATCEGISTQ---------------- 600
Fly 601 ----------------------------------------------------------------- 600
Fly 601 ----------VTN-----------------CTQHGGWTEWSAWSPCSQTCGIAVKIRRRTCGNPR 638
Fly 639 PAFGGRTCVGSEQSEMYC-------------------------------------RHLPP----- 661
Fly 662 CPVAKPQS---------VDGGWGPWGEWSECSAQCGGGFRMRRRECNDPAPLN------------ 705
Fly 706 -------------------------------------GGMECPG--------------------- 712
Fly 713 -----CRLD----------YEECNMQSCQEVRKL------------SAWTPWLTVTGSGNSSEPH 750
Fly 751 MERRFR-----------FVCRATSPDPSSVRIGLPKEESRNCHADGSCQRQVDHDSADSDAADWS 804
Fly 805 PCSVSCGGGVQQRHRGRGSQSRV----CNIH--------ACPAEEQ------------------- 838
Fly 839 -----------LSSNSLDNEL-------------------------------------------- 848
Fly 849 EHGE--WGCWSEWSACSVTCGLGLRRRTRRC----------------LAGHDRLCQGRALEEQKC 895
Fly 896 EMVPCEDFLGWSAWSEWSSCS---SDGIRLRHRRCLVEQPGSME----CRGAEFEKTACVPNECE 953
Fly 954 ETQTAS 959 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Sema5c | NP_611293.3 | Sema_5C | 65..496 | CDD:200526 | 12/48 (25%) |
| PSI | 497..546 | CDD:279745 | 11/69 (16%) | ||
| TSP1 | 556..607 | CDD:214559 | 22/162 (14%) | ||
| TSP1 | 610..663 | CDD:214559 | 22/94 (23%) | ||
| TSP1 | 674..725 | CDD:214559 | 25/135 (19%) | ||
| TSP1 | 802..834 | CDD:214559 | 14/43 (33%) | ||
| TSP1 | 853..901 | CDD:214559 | 18/63 (29%) | ||
| TSP1 | 906..953 | CDD:214559 | 19/53 (36%) | ||
| Sspo | XP_017177063.1 | VWD | 229..378 | CDD:214566 | |
| C8 | 434..505 | CDD:370094 | |||
| TIL | 509..564 | CDD:366828 | |||
| VWD | 593..753 | CDD:214566 | |||
| C8 | 791..863 | CDD:214843 | |||
| TIL | 866..919 | CDD:366828 | |||
| VWD | 1054..1201 | CDD:365869 | |||
| C8 | 1245..1311 | CDD:370094 | |||
| TIL | 1315..1371 | CDD:366828 | |||
| LDLa | 1416..1451 | CDD:238060 | |||
| LDLa | 1456..1490 | CDD:238060 | |||
| LDLa | 1492..1526 | CDD:238060 | |||
| LDLa | 1532..1563 | CDD:197566 | |||
| Ldl_recept_a | 1603..1639 | CDD:365841 | |||
| TSP1 | 1737..1788 | CDD:214559 | |||
| TIL | 1857..1908 | CDD:366828 | |||
| TSP1 | 1952..2005 | CDD:214559 | |||
| FA58C | <2142..2262 | CDD:330301 | |||
| LDLa | 2275..2309 | CDD:238060 | |||
| LDLa | 2414..2448 | CDD:238060 | 3/6 (50%) | ||
| LDLa | 2471..2505 | CDD:238060 | 6/36 (17%) | ||
| TSP1 | 2565..2617 | CDD:214559 | 20/57 (35%) | ||
| TIL | 2640..2682 | CDD:366828 | 0/41 (0%) | ||
| TSP1 | 2725..2774 | CDD:214559 | 20/48 (42%) | ||
| TSP_1 | 2841..2889 | CDD:365867 | 16/47 (34%) | ||
| TIL | 2893..2952 | CDD:366828 | 4/58 (7%) | ||
| VWC_out | 2954..3001 | CDD:214565 | 9/46 (20%) | ||
| TSP1 | 2994..3045 | CDD:214559 | 14/60 (23%) | ||
| TIL | 3097..3149 | CDD:366828 | 7/51 (14%) | ||
| TSP1 | 3193..3256 | CDD:214559 | 18/62 (29%) | ||
| TSP1 | 3262..3314 | CDD:214559 | 19/53 (36%) | ||
| TIL | 3322..3372 | CDD:366828 | |||
| TSP1 | 3418..>3458 | CDD:214559 | |||
| TSP1 | 3482..3526 | CDD:214559 | |||
| TIL | 3536..3592 | CDD:366828 | |||
| TSP1 | 3655..3699 | CDD:214559 | |||
| TSP1 | 3832..3884 | CDD:214559 | |||
| TSP1 | 3901..3949 | CDD:214559 | |||
| TSP1 | 3967..4020 | CDD:214559 | |||
| TSP1 | 4025..4077 | CDD:214559 | |||
| TIL | 4080..4135 | CDD:366828 | |||
| TSP1 | 4180..4230 | CDD:214559 | |||
| TSP1 | 4274..4325 | CDD:214559 | |||
| TSP1 | 4389..4440 | CDD:214559 | |||
| TIL | 4444..4499 | CDD:366828 | |||
| TSP1 | 4639..4687 | CDD:214559 | |||
| TIL | 4701..4747 | CDD:366828 | |||
| TSP1 | 4791..4840 | CDD:214559 | |||
| TIL | 4842..4896 | CDD:366828 | |||
| TIL | 4948..5006 | CDD:366828 | |||
| VWC | 5008..5063 | CDD:327433 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||