Sequence 1: | NP_611293.3 | Gene: | Sema5c / 37066 | FlyBaseID: | FBgn0284221 | Length: | 1093 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001036244.1 | Gene: | Sema3b / 20347 | MGIID: | 107561 | Length: | 749 | Species: | Mus musculus |
Alignment Length: | 869 | Identity: | 210/869 - (24%) |
---|---|---|---|
Similarity: | 337/869 - (38%) | Gaps: | 251/869 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 53 ISYQDLMST--AKRFYDPETTWYSEMLFDVARNQVIVGARDTLYRMSFD--LEPLERASWGATPS 113
Fly 114 EIAMCQAKGQ---SERWCRNYVRVLHSYGENQLYACGTNAFQPSCSW--------RQMENLTVTG 167
Fly 168 VDSGVVKCPFHPQANSTSLLQSNGQLFVGTATDFSGSDVAILRTGVESNKRFLRTKQYNNNWLSG 232
Fly 233 AQFVGSF---EAGH----FVYFLLRESAAEHM-SCGKVIYSRVARVCKNDVGGGGQLLRDNWTSF 289
Fly 290 LKARLNCSLPG-EYPYYFDEIQGMTYAESES----ILYATFRTSGSSIFGSAVCAYNLSSINAAF 349
Fly 350 DGPFKQQEHSDAAWKTVNTNQRSQF----QCGTSSIGHWLESSRYQLMDEAVQ------------ 398
Fly 399 -PIGAEPLYHSKLE-----QFGRLALDIINTKTEQVHVLFVASS-GNHIKKLSV----KYDGDGV 452
Fly 453 QTCLVELWQADDTGTSSLLNMAYLKVSDSLYLGTDLALTRIPAQHCS---RHVSQSSCLNSMDPY 514
Fly 515 CGWNELVERCMPQPQDSSVLQHWHQAPQITCPVLNAPIDGGWSTWSPWAVCQQHEQPDSNCQCRQ 579
Fly 580 RSCNNPQP---------------------QHGGA--TCEGISTQVTNCTQHGGWTEWSAWSPCSQ 621
Fly 622 TCGIAVKIRRRTC------GNPRPAFGGRTCVGSEQS-EMYCRHLPPCPVAKPQSVDGGWGPWGE 679
Fly 680 WSECSAQCGGGFRM-RRRECNDPAPLNGGMECPGCRLDYEECNMQSCQEVRKLSAWTPWLTVTGS 743
Fly 744 GNSSEPHMERRFRFVCRATSPDPSSVRIGLPKEESRNCHADGSCQRQVDHDSADSDAADWSPCSV 808
Fly 809 SCGGGVQQRHRGRGSQSRVCNIHA 832 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema5c | NP_611293.3 | Sema_5C | 65..496 | CDD:200526 | 141/483 (29%) |
PSI | 497..546 | CDD:279745 | 8/51 (16%) | ||
TSP1 | 556..607 | CDD:214559 | 12/73 (16%) | ||
TSP1 | 610..663 | CDD:214559 | 16/59 (27%) | ||
TSP1 | 674..725 | CDD:214559 | 11/51 (22%) | ||
TSP1 | 802..834 | CDD:214559 | 5/31 (16%) | ||
TSP1 | 853..901 | CDD:214559 | |||
TSP1 | 906..953 | CDD:214559 | |||
Sema3b | NP_001036244.1 | Sema | 46..516 | CDD:417757 | 141/486 (29%) |
PSI | 515..>551 | CDD:214655 | 13/81 (16%) | ||
Ig | 575..665 | CDD:416386 | 23/95 (24%) | ||
Ig strand A | 575..580 | CDD:409353 | 0/4 (0%) | ||
Ig strand B | 585..593 | CDD:409353 | 2/7 (29%) | ||
Ig strand C | 599..605 | CDD:409353 | 2/10 (20%) | ||
Ig strand C' | 607..610 | CDD:409353 | 1/3 (33%) | ||
Ig strand D | 620..624 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 627..634 | CDD:409353 | 0/6 (0%) | ||
Ig strand F | 640..649 | CDD:409353 | 3/8 (38%) | ||
Ig strand G | 652..665 | CDD:409353 | 2/12 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |