Sequence 1: | NP_611293.3 | Gene: | Sema5c / 37066 | FlyBaseID: | FBgn0284221 | Length: | 1093 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001230001.1 | Gene: | Sema3a / 20346 | MGIID: | 107558 | Length: | 772 | Species: | Mus musculus |
Alignment Length: | 575 | Identity: | 157/575 - (27%) |
---|---|---|---|
Similarity: | 272/575 - (47%) | Gaps: | 106/575 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 44 DLLENDSRYISYQDLMSTAKRFYDPETTWYSEMLFDVARNQVIVGARDTLYRMSFDL---EPLER 105
Fly 106 ASWGATPSEIAMCQAKGQS-ERWCRNYVRVLHSYGENQLYACGTNAFQPSCSWRQMEN------- 162
Fly 163 -LTVTGVDSGVVKCPFHPQANSTSLLQSNGQLFVGTATDFSGSDVAILRTGVESNKRFLRTKQYN 226
Fly 227 NNWLSGAQFVGSFEAGHF-----------VYFLLRESAAEHMSCGKVIYSRVARVCKNDVGGGGQ 280
Fly 281 LLRDNWTSFLKARLNCSLPGE--YPYYFDEIQGMTYAESES----ILYATFRTSGSSIFGSAVCA 339
Fly 340 YNLSSINAAFDGPFKQQEHSDAAWKTVNTNQRSQF----QCGTSSIGHWLESSRYQLMDEAVQ-- 398
Fly 399 -----------PIGAEPL-------YHSKLEQFGRLALDIINTKTEQVHVLFVASS-GNHIKKLS 444
Fly 445 VKYD--GDGVQTCLVELWQADDTGTSSLLNMAYLKVSDSLYLGTDLALTRIPAQHCSRH-VSQSS 506
Fly 507 CLNSMDPYCGWN-ELVERCMP------QPQD---------SSVLQHW--HQAPQI 543 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema5c | NP_611293.3 | Sema_5C | 65..496 | CDD:200526 | 136/486 (28%) |
PSI | 497..546 | CDD:279745 | 17/66 (26%) | ||
TSP1 | 556..607 | CDD:214559 | |||
TSP1 | 610..663 | CDD:214559 | |||
TSP1 | 674..725 | CDD:214559 | |||
TSP1 | 802..834 | CDD:214559 | |||
TSP1 | 853..901 | CDD:214559 | |||
TSP1 | 906..953 | CDD:214559 | |||
Sema3a | NP_001230001.1 | Sema_3A | 26..518 | CDD:200510 | 140/510 (27%) |
PSI | 516..>552 | CDD:214655 | 9/35 (26%) | ||
Ig_Sema3 | 580..671 | CDD:409455 | 0/2 (0%) | ||
Ig strand B | 594..598 | CDD:409455 | |||
Ig strand C | 606..610 | CDD:409455 | |||
Ig strand E | 633..637 | CDD:409455 | |||
Ig strand F | 647..652 | CDD:409455 | |||
Ig strand G | 664..667 | CDD:409455 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 729..772 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |