DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sema5c and adt-1

DIOPT Version :10

Sequence 1:NP_611293.3 Gene:Sema5c / 37066 FlyBaseID:FBgn0284221 Length:1093 Species:Drosophila melanogaster
Sequence 2:NP_510116.2 Gene:adt-1 / 181412 WormBaseID:WBGene00000082 Length:1461 Species:Caenorhabditis elegans


Alignment Length:931 Identity:209/931 - (22%)
Similarity:291/931 - (31%) Gaps:348/931 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 CQAKGQSERWCRNYVRVLHSYGENQLYACGTNAFQPSCSWRQMENLTVTGVDSGVVKCPFHPQAN 182
            ||...:..|.|...:|....:||.:             .|.........||......| ...|.:
 Worm   741 CQGVSEESRPCEGVLRDCEEFGEWK-------------EWGSCSEKCALGVQKRFRPC-LTDQCS 791

  Fly   183 STSLLQSNGQLFVGTATDFSGSDVAILRTGVESNKRFLRTKQYNNNWLSGAQFVGSFEAGHFVYF 247
            |..|.:.......|..|::                         :.|.|.:|             
 Worm   792 SKHLQEERPCDNEGCWTNW-------------------------DEWSSCSQ------------- 818

  Fly   248 LLRESAAEHMSCGKVIYSRVARVCKNDVGGGGQL----------LRDNWTSFLKARLNCSL---- 298
                      |||.....|: |.|.:|...|..|          :..:|..:|...::|.:    
 Worm   819 ----------SCGGGRRYRI-RKCLDDKCDGDDLEKESCNTQKCISQSWGDWLPCSVSCGIGFQI 872

  Fly   299 -----PGEYPYYFDEIQGMTYAESESILYATFRTSGSSIFG-----SAVCAYNL----------- 342
                 .||.....:: |..|..:.:  ..:.|..|..|.:|     ||.|...|           
 Worm   873 RERLCDGELCATANK-QARTCNQQQ--CPSAFSLSVWSEWGEWTTCSATCGEGLQSRERSCRRGS 934

  Fly   343 ------SSINAAFDGPFKQQEHSDAAWKTVNTNQRSQFQCGTSSIGHWLESSRYQL--------- 392
                  |......:||.   |||...|....|       |.|.|    ...||.::         
 Worm   935 CTEDDASQTRRCVNGPC---EHSYLTWSEWTT-------CETCS----SFDSRKRIAKCDGTTEN 985

  Fly   393 ----MDEAVQPIGAEPLYHS---------KL-------EQFGRLALDIINTKTEQVH-------- 429
                :||....|......||         ||       :.|||..|.|     |.:|        
 Worm   986 CQDKIDEETCDIACLREKHSFGPISPRRPKLITSNDLRKAFGRPLLPI-----ESIHSEKWSEWG 1045

  Fly   430 -VLFVASSGNHIKKLSVKYDGDGVQ--TCLVELWQADDTGTSSLLNMAYLKVSDSLYLGTDLALT 491
             ......||..::.       .|.|  :|..:..|.::...:|.|         .|::.:|.:  
 Worm  1046 PCSVTCGSGRRVRT-------RGCQEASCPEQHIQTEECNLNSCL---------ELFIWSDWS-- 1092

  Fly   492 RIPAQHCSRHVSQSSCLNSMDPYCGWNEL-------VERCMPQPQDSS------VLQHWHQAPQI 543
                 .||:...|.. :.:....|.:|..       ..||...|..||      :.::...||: 
 Worm  1093 -----SCSKSCGQDG-IQTRQKLCLFNNAECSSYAESRRCKDLPSCSSISSGRTISENGFDAPR- 1150

  Fly   544 TCPVLNAPIDGGWSTWSPWAVCQQHEQPDSNC----QCRQRSCN--NPQPQH--GGATCEGISTQ 600
                        ||.||.|:.|        :|    ..|:|.|.  :|..|.  .||..|.|...
 Worm  1151 ------------WSEWSSWSAC--------SCFSLTSTRRRFCQVVDPTVQGFCAGAILEQIPCA 1195

  Fly   601 VTNCT-QHGGWTEWSAWSPCSQTCG-IAVKIRRRTCGNPRPAFGGRTCVGSEQSEMYCRHLPPC- 662
            ..:|: ..|||:.||.||.||:.|| ...:||.|.|..|.|:..|..|.|      |.....|| 
 Worm  1196 PGSCSPSAGGWSLWSEWSSCSKDCGDTGHQIRNRMCSEPIPSNRGAYCSG------YSFDQRPCV 1254

  Fly   663 --PVAKPQSVDGGWGPWGEWSECSAQCGGGFRMRRRECNDPAPLNGGMECPGCRLDYEECNMQSC 725
              .|...:.|||||..|..||||:..|..|.|.|.|.|.:|.|..||.:|.|...:...|.    
 Worm  1255 MDNVCSDEKVDGGWTDWTAWSECTDYCRNGHRSRTRFCANPKPSQGGAQCTGSDFELNPCF---- 1315

  Fly   726 QEVRKLSAWTPWLTVTGSGNSSEPHMERRFRFVCRATSPDPSSVRIGLPKEESRNCHADGSCQRQ 790
                                                   ||:            .||.       
 Worm  1316 ---------------------------------------DPA------------RCHL------- 1322

  Fly   791 VDHDSADSDAADWSPCSVSCGGGVQQRHR--------------GRGSQSRVCNIHACPAEEQLSS 841
              .|...|..:||:|||.|||.|||.|.|              |...|:.:|::.||        
 Worm  1323 --RDGGWSTWSDWTPCSASCGFGVQTRDRSCSSPEPKGGQSCSGLAHQTSLCDLPAC-------- 1377

  Fly   842 NSLDNELEHGEWGCWSEWSACSVTCGLGLRRRTRRC----LAGHDRLCQGRALEEQKCEMVP--- 899
               |:|.: |||..|:|||.|...||:|.|.|.|.|    ::...:.|.||:.|..:|...|   
 Worm  1378 ---DHESD-GEWSAWNEWSGCMGNCGIGTRTRVRACVSPPVSDGGQPCFGRSSEITECRQSPSTA 1438

  Fly   900 -CEDFLGWSAWSEWSSCSSDG 919
             |..|:       .||..:||
 Worm  1439 LCSSFI-------TSSHLADG 1452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sema5cNP_611293.3 Sema_5C 65..496 CDD:200526 80/458 (17%)
PSI 497..546 CDD:396154 12/61 (20%)
TSP1 556..607 CDD:214559 17/59 (29%)
TSP1 610..663 CDD:214559 21/56 (38%)
TSP1 674..725 CDD:214559 19/50 (38%)
TSP1 802..834 CDD:214559 17/45 (38%)
TSP1 853..901 CDD:214559 19/55 (35%)
TSP1 906..953 CDD:214559 4/14 (29%)
adt-1NP_510116.2 Pep_M12B_propep <64..163 CDD:460254
ZnMc_ADAMTS_like 234..448 CDD:239801
ADAMTS_CR_2 466..534 CDD:465496
TSP1 710..752 CDD:214559 3/10 (30%)
PTZ00441 <762..>806 CDD:240420 9/57 (16%)
TSP1 807..851 CDD:214559 13/92 (14%)
TSP1 855..898 CDD:214559 7/45 (16%)
TSP1 906..952 CDD:214559 9/48 (19%)
TSP1 1041..1082 CDD:214559 6/47 (13%)
TSP1 1088..1130 CDD:214559 8/49 (16%)
TSP1 1151..1200 CDD:214559 16/56 (29%)
TSP1 1206..1257 CDD:214559 21/56 (38%)
TSP1 1268..1318 CDD:214559 20/92 (22%)
TSP1 1327..1378 CDD:214559 19/61 (31%)
TSP1 1385..1435 CDD:214559 18/49 (37%)
Blue background indicates that the domain is not in the aligned region.

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