Sequence 1: | NP_611293.3 | Gene: | Sema5c / 37066 | FlyBaseID: | FBgn0284221 | Length: | 1093 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001379344.1 | Gene: | smp-1 / 173351 | WormBaseID: | WBGene00004889 | Length: | 714 | Species: | Caenorhabditis elegans |
Alignment Length: | 482 | Identity: | 149/482 - (30%) |
---|---|---|---|
Similarity: | 234/482 - (48%) | Gaps: | 59/482 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 83 NQVIVGARDTLYRMSFD-LEPLERASWGATPSEIAMCQAKGQSERWCRNYVRVLHSYGENQLYAC 146
Fly 147 GTNAFQPSCSWRQMENLTVT--GVDS-----GVVKCPFHPQANSTSL-LQSNGQLFVGTATDFSG 203
Fly 204 SDVAILRTGVE---SNKRF--LRTKQYNNNWLSGAQFVGSFEAGHFVYFLLRESAAEHMSCGK-- 261
Fly 262 VIYSRVARVCKNDVGGGGQLLRDNWTSFLKARLNCSLP-GEYPYYFDEIQGMT----YAESESIL 321
Fly 322 YATFRTSGSSIFGSAVCAYNLSSINAAFD-GPFKQQEHSDAAWKTVNTNQRSQFQCGTSSIGHWL 385
Fly 386 ESSRYQLMDEAVQPIGAEPLYHSKL---------EQFGRLALDIINTKTEQVH--------VLFV 433
Fly 434 ASSGNHIKKLSVKYDGDGVQTCLVELWQADDTGTSSLLNMAYLKVSDSLYLGTDLALTRIPAQHC 498
Fly 499 SRHVSQSSCLNSMDPYCGWNELVERCM 525 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema5c | NP_611293.3 | Sema_5C | 65..496 | CDD:200526 | 139/451 (31%) |
PSI | 497..546 | CDD:279745 | 10/29 (34%) | ||
TSP1 | 556..607 | CDD:214559 | |||
TSP1 | 610..663 | CDD:214559 | |||
TSP1 | 674..725 | CDD:214559 | |||
TSP1 | 802..834 | CDD:214559 | |||
TSP1 | 853..901 | CDD:214559 | |||
TSP1 | 906..953 | CDD:214559 | |||
smp-1 | NP_001379344.1 | Sema_1A | 49..497 | CDD:200498 | 139/453 (31%) |
PSI | 496..547 | CDD:214655 | 10/29 (34%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S5741 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.860 |