Protein Alignment Sema5c and nas-36

DIOPT Version :10

• Sequence 1: NP_611293.3
• Gene: Sema5c / 37066
• FlyBaseID: FBgn0284221
• Length: 1093
• Species: Drosophila melanogaster
• Sequence 2: NP_492109.2
• Gene: nas-36 / 172506
• WormBaseID: WBGene00003552
• Length: 617
• Species: Caenorhabditis elegans
• Alignment Length: 269
• Identity: 62/269 - (23%)
• Similarity: 94/269 - (34%)
• Gaps: 56/269 - (20%)

  Fly   655 YCRHLPPCPVAKPQSVDGGWGPWGEWSEC------------------SAQCGGGFRMRR--RECN 699
            ||:  ..|...|.:..:||:....:.|||                  :|:|||..::..  :|..
 Worm   320 YCK--DECKSEKTKCENGGYMRPSKCSECLCPDGLGGEKCEKNEDSKNAECGGIIKLTEEWKEIE 382

  Fly   700 DPAPLNGGMECPGCRLDYEECNMQSCQEVRKLSAWTPWLTVTGSGNSSEPHMERRFRFVCRATSP 764
            .|     ....||...|      |.|.          ||.....|...|......|.|:|.:|..
 Worm   383 SP-----NYPDPGYEAD------QKCS----------WLLKAEKGKRVEIEFIEDFSFLCTSTCV 426

  Fly   765 DPSSVRIGLPKEESRNCHADGSC--QRQVDHDSADSDAADWSPCSVSCGGGVQQRHRGRGSQSRV 827
            |...::|   .::.||......|  :.::...|....|.......:|...|.:.:.:...::.|.
 Worm   427 DFVELKI---SDDLRNTGFRFCCYDKPEISFVSQTDTAIIIFRSQLSTDIGFKIQAKSTDAEPRT 488

  Fly   828 CNIHACPAEEQLSSNSLDNELEHGEWGCWSEWSACSVTC-GLGLRRRTRRCLAGHDRLCQGRALE 891
             .|........|:..::|   ....|..|.|||.||.|| |.|:|.|.|.|   ..:.|:||..|
 Worm   489 -TIAPTIITTTLAPITVD---APNVWADWGEWSMCSRTCGGCGIRSRVRSC---RSKKCEGRRQE 546

  Fly   892 EQKCEMVPC 900
            ...|.:..|
 Worm   547 FGTCNLKAC 555

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sema5c	NP_611293.3	Sema_5C	65..496	CDD:200526
		PSI	497..546	CDD:396154
		TSP1	556..607	CDD:214559
		TSP1	610..663	CDD:214559	2/7 (29%)
		TSP1	674..725	CDD:214559	13/70 (19%)
		TSP1	802..834	CDD:214559	4/31 (13%)
		TSP1	853..901	CDD:214559	21/49 (43%)
		TSP1	906..953	CDD:214559
nas-36	NP_492109.2	Astacin	134..323	CDD:426242	2/4 (50%)
		CUB	380..478	CDD:214483	24/121 (20%)
		TSP1	510..556	CDD:214559	21/49 (43%)