Sequence 1: | NP_611293.3 | Gene: | Sema5c / 37066 | FlyBaseID: | FBgn0284221 | Length: | 1093 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001337049.1 | Gene: | SEMA3C / 10512 | HGNCID: | 10725 | Length: | 769 | Species: | Homo sapiens |
Alignment Length: | 523 | Identity: | 144/523 - (27%) |
---|---|---|---|
Similarity: | 254/523 - (48%) | Gaps: | 73/523 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 52 YISYQDLMSTAKRFY---DPETTWYSEMLFDVARNQVIVGARDTLYRMSFDLEPLERAS--WGAT 111
Fly 112 PSEIAMCQAKGQS-ERWCRNYVRVLHSYGENQLYACGTNAFQPSCSW----RQMEN---LTVTGV 168
Fly 169 DSGVVKCPFHPQANSTSLLQSNGQLFVGTATDFSGSDVAILRTGVESNKRFLRTKQYNNNWLSGA 233
Fly 234 QFV-------GSFEAGHFVYFLLRESAAEHMSCGKVIYSRVARVCKNDVGGGGQLLRDNWTSFLK 291
Fly 292 ARLNCSLPGE--YPYYFDEIQGMTYAESE----SILYATFRTSGSSIFGSAVCAYNLSSINAAFD 350
Fly 351 GPFKQQEHSDAAWKTVNTNQRSQF-QCGTSSIGHWLESSR---------------YQLMDEAVQP 399
Fly 400 IGAEPL-------YHSKLEQFGRLALDIINTKTEQVHVLFVASSGNHIKKLSVKYDGDGVQTCLV 457
Fly 458 ----ELWQADDTGTSSLLNMAYLKVSDSLYLGTDLALTRIPAQHCSRHVSQSSCLN---SMDPYC 515
Fly 516 GWN 518 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema5c | NP_611293.3 | Sema_5C | 65..496 | CDD:200526 | 133/483 (28%) |
PSI | 497..546 | CDD:279745 | 8/25 (32%) | ||
TSP1 | 556..607 | CDD:214559 | |||
TSP1 | 610..663 | CDD:214559 | |||
TSP1 | 674..725 | CDD:214559 | |||
TSP1 | 802..834 | CDD:214559 | |||
TSP1 | 853..901 | CDD:214559 | |||
TSP1 | 906..953 | CDD:214559 | |||
SEMA3C | NP_001337049.1 | Sema_3C | 63..532 | CDD:200512 | 132/483 (27%) |
PSI | 531..568 | CDD:214655 | 8/25 (32%) | ||
Ig_Semaphorin_classIII | 593..682 | CDD:143279 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |