DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sema5c and adamts2

DIOPT Version :10

Sequence 1:NP_611293.3 Gene:Sema5c / 37066 FlyBaseID:FBgn0284221 Length:1093 Species:Drosophila melanogaster
Sequence 2:XP_012815203.2 Gene:adamts2 / 100492431 XenbaseID:XB-GENE-492342 Length:1170 Species:Xenopus tropicalis


Alignment Length:1285 Identity:240/1285 - (18%)
Similarity:376/1285 - (29%) Gaps:496/1285 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 RDTLYRMSFDLEPLERASWGATPSEIAMCQAKGQSERWCRNYVRVLHSYGENQLYACGTNAFQPS 154
            ||:|      |:.||..|. .||   ....:||:       ||....:..|...|....:..:.:
 Frog    29 RDSL------LKKLEEYSL-VTP---VSTDSKGK-------YVSHSVTKRETHRYRRDASNLEKT 76

  Fly   155 CSWRQMENLTVTG--------VDSGVV----KCPFHPQANSTSLLQSNGQ-LFVGTATDFSGSDV 206
            .:.|...|:||.|        |:|.:|    ...:...||.|.:...|.. |:||..||...:.|
 Frog    77 SAERIYYNVTVFGREFHLKLRVNSKLVAPGATIEWEEDANVTVIEPLNTNCLYVGDITDLPNASV 141

  Fly   207 AILRTGVESNKRFLRTKQYNNNWLSGAQFVGSFEAGHFVYFLLRESAAEHMSCGKVIYSRVARVC 271
            ||                .|.:.|:|  .:.:.|...|:..|.::...|......::|.|.| |.
 Frog   142 AI----------------SNCDGLAG--IIRTEEEEFFIEPLEKDKEGEDEGRVHIVYRRSA-VL 187

  Fly   272 KNDVGGGGQLLRDNWTSFLKARLNCSLPGEYPYYFDEIQGMTYAESESILYATFRTSGSSIFG-- 334
            |:..|....:..:..|.            ..|...:.|......:..|....|.|.:....|.  
 Frog   188 KSFQGNNTDIQLNETTQ------------HSPNLLENIIDNVQEQVNSTRKRTRRHASDDDFNIE 240

  Fly   335 ---------------SAVCAYNLSSINAAFDGPFKQQEHSDAAWKTVN-----------TNQRSQ 373
                           ..|..|.|:.:|..     .:..|.::....:|           :...|.
 Frog   241 ILLGVDDSVVQFHGKEYVQKYLLTLLNIV-----NEIYHDESLGAHINVVLVRIIMLSHSKSSSL 300

  Fly   374 FQCGTSSIGHWLES-SRYQLMDEAVQPIGAEPLYHSKL-----EQFGRLALDIINTKTEQVH--- 429
            .:.|..|  ..||: .|:..:.:..:...||  ||...     ::||...:......|...|   
 Frog   301 IEVGNPS--QSLENVCRWAYLQQKPETGHAE--YHDHAIFLTRQEFGPSGMQGYAPVTGMCHPVR 361

  Fly   430 ------------VLFVASSGNHIKKLSVKYDGDGVQTCLVELWQADDTGTSSLLNMAYLKVSDSL 482
                        ...||....|:  |.:::||.| ..|                       .|.:
 Frog   362 SCTLNHEDGFSSAFVVAHETGHV--LGMEHDGQG-NRC-----------------------GDEV 400

  Fly   483 YLGTDLA-----------LTRIPAQHCSRHVSQSSCLNSMDPYCGWNELVERCMPQPQDSSVLQH 536
            .:|:.:|           .:|...|..||:::...||.. ||:                    :|
 Frog   401 RMGSIMAPLVQAAFHRFHWSRCSQQELSRYLNSYDCLRD-DPF--------------------EH 444

  Fly   537 -WHQAPQITCPVLN------APIDGGWSTWSPWAVCQQHEQPDSNCQCRQRSCNNPQPQHGGATC 594
             |...||:  |.::      ...|.|..    :.:|......|   .|:|..|::....:...|.
 Frog   445 NWPSLPQL--PGIHYSMNEQCRFDFGLG----YMMCTAFRTFD---PCKQLWCSHTDNPYFCKTK 500

  Fly   595 EGISTQVTNCT-------------------QHGGWTEWSAWSPCSQTCGIAVKIRRRTCGNPRPA 640
            :|.....|.|:                   |.|.|.:||.:..||::||..|:.|.|:|.||.||
 Frog   501 KGPPLDGTMCSYGKHCFKGHCIWLTPDILRQDGNWGQWSKFGSCSRSCGTGVRYRTRSCDNPHPA 565

  Fly   641 FGGRTCVGSEQSEMYCRHLPPC----------------PVAKPQSVDGGWGPW---GEWSECSAQ 686
            .|||:|.|.......| :...|                |..:.|.....|.|:   .|...|...
 Frog   566 NGGRSCSGPSYELQLC-NTEDCKTDFDDFREEQCKQWDPYFEYQDSKHNWLPYDHPDEKERCHLY 629

  Fly   687 CGGGFRMRRRECNDPAPLNGGMECPGCRLDYE---------ECNMQSCQEVRKLSAWTPWLTVTG 742
            |      :.:|..|...:. .:...|.|..|:         ||....|.:|...........|.|
 Frog   630 C------QSKETGDVVYMK-RLTHDGTRCSYKDSYNICVRGECLKVGCDKVIGSKKKEDKCGVCG 687

  Fly   743 SGNS----------SEPHMERRFR--------------------------------FVC---RAT 762
            ..||          ..|..:...|                                |:.   ..|
 Frog   688 GDNSHCKVVKGTFTRTPRKQGNVRIFEIPVGARHLLIQETGASIHNLAIKNQASGKFILNDENVT 752

  Fly   763 SPD------------------------------PSSVRIGLPKEESR-------NCHADGSCQRQ 790
            .||                              |.::.: :|:..|:       ..|.|..   .
 Frog   753 LPDSKIFVNMGIEWEYQNDDNRETVQTMGPLHNPITILV-IPRGHSKISLSYKYMIHEDSF---N 813

  Fly   791 VDHDSADSDAA--------DWSPCSVSCGGGVQQRHRGRGSQS--------------------RV 827
            ||:::...|..        .||.||..||||.|....|...:|                    ||
 Frog   814 VDNNNVVEDVVVTYEWTLKKWSHCSKPCGGGHQFTKYGCRRKSDHKMVHKNFCDSIQKLKPIRRV 878

  Fly   828 CNIHACPAEEQLSSNSLDNELEHGEWGCWSEWSACSVTCG-LGLRRRTRRCL---------AGHD 882
            ||:..|.....:|                .||..|:|||| .|.:.||.:|:         :.|:
 Frog   879 CNLQECSQPLWIS----------------GEWEPCTVTCGKSGYQFRTVKCIQPLNDNKNRSVHN 927

  Fly   883 RLC-QGRALEEQKCEMVPCEDFLGWSAW--SEWSSCS---SDGIRLRHRRCLVEQPGSMECRGAE 941
            :.| ..|...::.|...||.     :.|  ..||.||   .:|...|...|           |::
 Frog   928 KYCSDDRPEAKRPCNRQPCP-----AQWRIGPWSQCSVTCGNGTEERQVHC-----------GSD 976

  Fly   942 FEKTACVPNE-------CEETQTASTATLP---------------------------------IV 966
            ..|:|....|       |..:..:..|:.|                                 :|
 Frog   977 INKSANCSEEKPETIRICRLSPCSGNASDPYKKNYIVQWLSKLDPDYPLHKISSKESCLEDKSMV 1041

  Fly   967 IFVGLL--------FTVACCL---ATYRFTKKRFMLSAEEAL---------NKTTTTTASFDTYP 1011
            ..:|:|        ::..||.   |:..:...:...|::.||         |.|.|.|..   |.
 Frog  1042 CRLGILQRYCSVPGYSRMCCKACNASQLYNDSKMNSSSDPALPIPSPPTLYNTTVTFTPD---YK 1103

  Fly  1012 NQYSSLPTKDYYDQR--------------------PKRQSSFRMPAKTSN 1041
            ...|:....|.::.|                    |:|:|:|   .:|.|
 Frog  1104 QNVSNPNITDQHNNRVDVPYKIQELQNEVPQLNAIPRRRSTF---GRTKN 1150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sema5cNP_611293.3 Sema_5C 65..496 CDD:200526 87/478 (18%)
PSI 497..546 CDD:396154 10/49 (20%)
TSP1 556..607 CDD:214559 9/69 (13%)
TSP1 610..663 CDD:214559 22/68 (32%)
TSP1 674..725 CDD:214559 12/62 (19%)
TSP1 802..834 CDD:214559 15/51 (29%)
TSP1 853..901 CDD:214559 16/58 (28%)
TSP1 906..953 CDD:214559 12/58 (21%)
adamts2XP_012815203.2 Pep_M12B_propep 41..181 CDD:460254 35/168 (21%)
ZnMc_ADAMTS_like 238..438 CDD:239801 36/234 (15%)
ADAMTS_CR_2 453..522 CDD:465496 12/75 (16%)
TSP1 535..586 CDD:214559 21/51 (41%)
ADAMTS_CR_3 <619..693 CDD:437068 16/80 (20%)
ADAMTS_spacer1 695..808 CDD:461796 9/113 (8%)
TSP1_ADAMTS 829..884 CDD:465950 15/54 (28%)
TSP1_ADAMTS 889..946 CDD:465950 16/72 (22%)
TSP1_ADAMTS 950..999 CDD:465950 13/59 (22%)

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