| Sequence 1: | NP_611293.3 | Gene: | Sema5c / 37066 | FlyBaseID: | FBgn0284221 | Length: | 1093 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_031755080.1 | Gene: | sema4b / 100489037 | XenbaseID: | XB-GENE-922109 | Length: | 850 | Species: | Xenopus tropicalis |
| Alignment Length: | 603 | Identity: | 160/603 - (26%) |
|---|---|---|---|
| Similarity: | 282/603 - (46%) | Gaps: | 88/603 - (14%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 63 KRFYDPETTWYSEMLFDVARNQVIVGARDTLYRM-SFDLEPLE---RASWGATPSEIAMCQAKGQ 123
Fly 124 S-ERWCRNYVRVLHSYGENQLYACGTNAFQPSCSWRQMENLTVTG-------VDSGVVKCPFHPQ 180
Fly 181 ANSTSLLQSNGQLFVGTATDFSGSDVAILRTGVESNKRFLRTKQYNNNWLSGAQFVG------SF 239
Fly 240 EAGH------FVYFLLRESAAEHMSCGKVIYSRVARVCKNDVGGGGQLLRDNWTSFLKARLNCSL 298
Fly 299 PGE-YPYYFDEIQGM---TYAE---SESILYATFRT------SGSSIFGSAVCAYNLSSINAAFD 350
Fly 351 GPFKQQEHSDAAWKTVNTNQRSQFQ---CGTSSIGHWLESSRYQ-------------LMDEAVQP 399
Fly 400 IGAEPLYHSKLEQFGRLALDIINTKTEQVHVLFVASSGNHI-KKLSVKYDGDGVQTCLVELWQAD 463
Fly 464 DTGTSSLLNMAYLKVSDSL-YLGTDLALTRIPAQHCSRHVSQSSCLNSMDPYCGWNELVERCMPQ 527
Fly 528 PQDSSVLQHWHQAPQITCPVLNAPIDGGWSTWSPWAVCQQHEQPDSNCQCRQRSC-NNPQPQHGG 591
Fly 592 ATCEGISTQVTNCTQHGG 609 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Sema5c | NP_611293.3 | Sema_5C | 65..496 | CDD:200526 | 131/485 (27%) |
| PSI | 497..546 | CDD:279745 | 16/48 (33%) | ||
| TSP1 | 556..607 | CDD:214559 | 8/51 (16%) | ||
| TSP1 | 610..663 | CDD:214559 | 160/603 (27%) | ||
| TSP1 | 674..725 | CDD:214559 | |||
| TSP1 | 802..834 | CDD:214559 | |||
| TSP1 | 853..901 | CDD:214559 | |||
| TSP1 | 906..953 | CDD:214559 | |||
| sema4b | XP_031755080.1 | Sema | 55..520 | CDD:417757 | 131/486 (27%) |
| PSI | 521..564 | CDD:214655 | 16/48 (33%) | ||
| Ig | 594..669 | CDD:416386 | 8/34 (24%) | ||
| Ig strand B | 602..610 | CDD:409353 | 2/10 (20%) | ||
| Ig strand C | 616..622 | CDD:409353 | 0/5 (0%) | ||
| Ig strand C' | 624..627 | CDD:409353 | 1/1 (100%) | ||
| Ig strand D | 631..635 | CDD:409353 | |||
| Ig strand E | 637..643 | CDD:409353 | |||
| Ig strand F | 649..658 | CDD:409353 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D41799at33208 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 2.010 | |||||