Sequence 1: | NP_611293.3 | Gene: | Sema5c / 37066 | FlyBaseID: | FBgn0284221 | Length: | 1093 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002942249.3 | Gene: | sema6b / 100487068 | XenbaseID: | XB-GENE-6050017 | Length: | 917 | Species: | Xenopus tropicalis |
Alignment Length: | 851 | Identity: | 230/851 - (27%) |
---|---|---|---|
Similarity: | 346/851 - (40%) | Gaps: | 206/851 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 87 VGARDTLYRMSFD-----LEPLERASWGATPSEIAMCQAKGQSERWCRNYVRVLHSYGENQLYAC 146
Fly 147 GTNAFQPSCSWRQMENLTVTG-VDSGVVKCPFHPQANSTSLLQSNGQLFVGTATDFSGSDVAILR 210
Fly 211 TGVESNKRFLRTKQYNNNWLSGAQFVGSFEAGHFVYFLLRESAAEHMSCGKVIYSRVARVCKNDV 275
Fly 276 GGGGQLLRDNWTSFLKARLNCSLPGEYPYYFDEIQ---GMTYAESESILYATFRTSGSSIFGSAV 337
Fly 338 CAYNLSSINAAFDGPFKQQEHSDAAWKTVNTN--QRSQFQCGTSSIGHW--LESSR--------- 389
Fly 390 ---YQLMDEAVQPIGAEPLYHSKL--EQFGRLALDIINTKTEQVH----VLFVAS-SGNHIKKLS 444
Fly 445 V-KYDGDGV-----QTCLVEL----------WQADDTGTSSLLNMAYLKVSDSLYLGTDLALTRI 493
Fly 494 PAQHCSRHVS-QSSCLNSMDPYCGWNELVERCMPQPQ---------------------DSSVLQH 536
Fly 537 W--HQAPQITCPVL----------NAPIDGGWSTWSPWAVCQQHEQPDSNCQCRQRSCNNPQPQH 589
Fly 590 GGATCEGISTQ---------VTNCTQHGGWTEWSAWSPCSQTCGIAVKIRRRTCGNPRPAFGGRT 645
Fly 646 CVGSEQSEM----------YCRH-------------LPPCPVAKPQSVDGGWGPWGEWSECSAQC 687
Fly 688 GGGFRMRRRECNDP--APLNGGMECPGCRLDYEE-CNM-QSCQEVRKLSAWTP-------WLTVT 741
Fly 742 GSGNSSEPHMERRFRFVCRAT---------SPDPSSVRIGLPKE-----ESRNCHADGSCQR--- 789
Fly 790 QVDHDS 795 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema5c | NP_611293.3 | Sema_5C | 65..496 | CDD:200526 | 151/456 (33%) |
PSI | 497..546 | CDD:279745 | 16/72 (22%) | ||
TSP1 | 556..607 | CDD:214559 | 11/59 (19%) | ||
TSP1 | 610..663 | CDD:214559 | 12/75 (16%) | ||
TSP1 | 674..725 | CDD:214559 | 17/54 (31%) | ||
TSP1 | 802..834 | CDD:214559 | |||
TSP1 | 853..901 | CDD:214559 | |||
TSP1 | 906..953 | CDD:214559 | |||
sema6b | XP_002942249.3 | Sema | 52..518 | CDD:387663 | 151/456 (33%) |
PSI | 519..>548 | CDD:214655 | 11/28 (39%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |