Protein Alignment stau and tarbp2

DIOPT Version :9

• Sequence 1: NP_476751.1
• Gene: stau / 37065
• FlyBaseID: FBgn0003520
• Length: 1026
• Species: Drosophila melanogaster
• Sequence 2: XP_012812551.1
• Gene: tarbp2 / 595034
• XenbaseID: XB-GENE-491800
• Length: 361
• Species: Xenopus tropicalis
• Alignment Length: 474
• Identity: 103/474 - (21%)
• Similarity: 160/474 - (33%)
• Gaps: 149/474 - (31%)

  Fly   561 SASEEALEDSMDEGDKKSPISQVHEIGIKRNMTVHFKVLREEGPAHMKNFITACIVGSI------ 619
            |:...::|..:.....|:|||.:.|.|.:...|..:.:|:.||.||..||.....||.|
 Frog    12 SSGFPSIEQMLASSPGKTPISLLQEYGTRVGKTPVYDLLKAEGQAHQPNFTFRVSVGDINCTGQC 76

  Fly   620 ----VTEGEGNGKKVSKKRAAEKMLVELQKLPPLTPTKQTPLKRIKVKTPGKSGAAAREGSVVSG 680
                .|.|:|..||.:|.:|||..|..|                   |.....|....|.||:..
 Frog    77 SAPPSTRGQGPSKKAAKHKAAEVALSLL-------------------KGGDMFGMMCEENSVMLS 122

  Fly   681 TDGPTQ-------TGKPERRKRLNPPKDKLIDMDDADNPITKLIQLQQTRKEKEPIFELIAKNGN 738
            .:.|.:       :..|..|......|..|.......||:..|.:|...:..:.|.:.:..::|
 Frog   123 VEQPVELREVADVSPPPTNRNHTIEMKPPLSAQQSECNPVGALQELVVQKGWRLPEYTVTQESG- 186

  Fly   739 ETARRREFVMEVSASGSTARGTGNSKKLAKRNAAQALFELLEAVQVTPTNETQSSEECSTSATMS 803
             .|.|:||.|..........|:|.||||||||||..
 Frog   187 -PAHRKEFTMTCRVERFLEIGSGTSKKLAKRNAAAK----------------------------- 221

  Fly   804 AVTAPAVEATAEGKVPMVATPVGPMPGILILRQNKKPAKKRDQIVIVKSNVESKEEEANKEVAVA 868
                                        ::|:.::.||:.|:       :.|::.||....:...
 Frog   222 ----------------------------MLLQIHRVPAEHRE-------SGETEPEEDQFSMGKL 251

  Fly   869 AEENSNNSANSGDSSNSSSGDSQATEAASESALNTSTGSNTSGVSSNSSNVGANTDGNNHAESKN 933
            .......:|.:.||..:|||         |..|                          |..|..
 Frog   252 DGSRGRGTACTWDSLRNSSG---------EKIL--------------------------HLRSNP 281

  Fly   934 NTESSSNSTSNTQSAGVHMKEQLLYLSKLLDFEVNFSDYPKGN-HNEFLTIVTLSTHPPQICHGV 997
            .|..||...|..|.           ||:...|::::.|..:.: ...:..:|.|||.|..:|||.
 Frog   282 LTILSSGFCSLLQD-----------LSEEQSFQISYLDIDEPSLSGLYQCLVELSTQPTTVCHGS 335

  Fly   998 GKSSEESQNDAASNALKIL 1016
            ..:.:.::.:||.|||:.|
 Frog   336 ATTRDAARANAAHNALQYL 354

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
stau	NP_476751.1	DSRM	312..375	CDD:214634
		DSRM	<529..555	CDD:294045
		DSRM	579..644	CDD:214634	26/74 (35%)
		DSRM	712..780	CDD:214634	22/67 (33%)
		Staufen_C	<953..1020	CDD:293091	18/65 (28%)
tarbp2	XP_012812551.1	DSRM_TARBP2_rpt1	26..107	CDD:380719	29/99 (29%)
		DSRM_TARBP2_rpt2	160..226	CDD:380681	24/124 (19%)
		DSRM_TARBP2_rpt3	287..358	CDD:380722	21/79 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910