DRSC/TRiP Functional Genomics Resources

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Protein Alignment stau and adarb1b

DIOPT Version :10

Sequence 1:NP_476751.1 Gene:stau / 37065 FlyBaseID:FBgn0003520 Length:1026 Species:Drosophila melanogaster
Sequence 2:XP_021334693.1 Gene:adarb1b / 558759 ZFINID:ZDB-GENE-030219-15 Length:750 Species:Danio rerio


Alignment Length:489 Identity:102/489 - (20%)
Similarity:162/489 - (33%) Gaps:121/489 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   577 KSPISQVHEI--GIKRNMTVHFKVLREEGPAHMKNFITACIVGSIVTEGEGNGKKVSKKRAAEKM 639
            |:.:.|::||  |::      :|:|.:.||.|...|:....|...:.||.|..||.:|..||||.
Zfish   128 KNALMQLNEIKPGLQ------YKLLSQTGPVHAPVFVMTVEVNGQLFEGSGPTKKKAKLNAAEKA 186

  Fly   640 LVELQKLPPLTPTKQTPLKRIKVKTP--------------GKSGAAAREGSVVSGTDG------- 683
            |....:.|..:.......:.:.|.|.              |....|..|.:...|::|       
Zfish   187 LRSFVQFPNASEAHLAMGRTLTVNTDFTSDQADFPDMLFNGFETPAPPEETFFLGSNGNGSLNPL 251

  Fly   684 -----PTQTGKPERRKRLNPPKDKLIDMDDADNPITKLIQLQQTRKEKEPIFELIAKNGNETARR 743
                 |...|.....:...||...........||:..|.:|:...|     :|.::::|...|  
Zfish   252 GEYPVPQAAGTNSLVQAPLPPPSSFASSASGKNPVMILNELRPGLK-----YEFVSESGESHA-- 309

  Fly   744 REFVMEVSASGSTARGTGNSKKLAKRNAAQALFELLEAVQVTPTNETQSSEECSTSATMSAVTAP 808
            :.|||.|:.......|:|.:|||||..||||....|..:|:..|...|..........:..|.|.
Zfish   310 KNFVMSVTVDSQMFEGSGRNKKLAKARAAQAALSSLFNMQLDQTPSRQPIPREGLQLHLPQVLAD 374

  Fly   809 AV---------EATAEGKVPMVATPVGPMPGILILRQNKKPAKKRDQIVIVKSN----------- 853
            ||         |.|.....|.....|  :.|:::.....   .|..|::.|.:.           
Zfish   375 AVSRLVVDKFSELTDNFTSPHARRKV--LAGVVMTTGTD---VKDAQVICVSTGTKCINGEYMSD 434

  Fly   854 -----------------------------VESKEEEANKEVAVAAEENSNNSANSGD----SSNS 885
                                         :.:.:||..|.:.:..|:......:|..    .|.|
Zfish   435 RGLALNDCHAEIIARRSLIRYLYMQLEHFLSNNKEEHQKSIFMQCEKRGYRLKDSVQFHLYISTS 499

  Fly   886 SSGDSQ---ATEAASE------------SALNTSTGSNTSGVSSNSSNVGANTDGNNHAESKNNT 935
            ..||::   ..||..|            ..|.|...|....:...|||.....||....| :..|
Zfish   500 PCGDARIFSPHEAGVEDQGDRHPNRKARGQLRTKIESGEGTIPVRSSNTIQTWDGVLQGE-RLLT 563

  Fly   936 ESSSNSTSNTQSAGV------HMKEQLLYLSKLL 963
            .|.|:..:.....|:      :..|.:.:.|.:|
Zfish   564 MSCSDKIARWNVVGIQGSLMSYFSEPIYFSSIIL 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stauNP_476751.1 DSRM_STAU_rpt1 311..373 CDD:380686
DSRM_STAU_rpt2 473..553 CDD:380687
DSRM_STAU_rpt3 579..643 CDD:380688 22/65 (34%)
DSRM_STAU_rpt4 711..780 CDD:380689 23/68 (34%)
DSRM_STAU_rpt5 952..1019 CDD:380690 3/12 (25%)
adarb1bXP_021334693.1 DSRM_RED1_rpt1 123..194 CDD:380724 23/71 (32%)
DSRM_RED1_rpt2 282..350 CDD:380727 24/74 (32%)
ADEAMc 371..747 CDD:214718 40/233 (17%)
Blue background indicates that the domain is not in the aligned region.

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