Sequence 1: | NP_476751.1 | Gene: | stau / 37065 | FlyBaseID: | FBgn0003520 | Length: | 1026 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012827226.2 | Gene: | stau1 / 549296 | XenbaseID: | XB-GENE-920408 | Length: | 719 | Species: | Xenopus tropicalis |
Alignment Length: | 873 | Identity: | 272/873 - (31%) |
---|---|---|---|
Similarity: | 379/873 - (43%) | Gaps: | 250/873 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 203 NNSNSNYAPKAILQNTY---RNQKVVVPPVVQEVTPVPEPPVTTNNATTNSTSNSTVIASEPVTQ 264
Fly 265 EDTSQKPETRQEPASADDHVSTGNIDATGALSNEDTSSSGRGGKDKTPMCLVNELARYNKITHQY 329
Fly 330 RLTEERGPAHCKT-----------------------FTVTLMLGDEEYSADGFKIKKAQHLAASK 371
Fly 372 AIEETMYKHPPPKIR--RSEEGGPMRTHITPTVELNALAMKLGQR-TFYLLDPTQIPPTDSIVPP 433
Fly 434 EFAGGHLLTAPGPGMPQPPPPPAYALRQRLGNGFVPIPSQPMHPHFFHGPGQRPFPPKFPSRFAL 498
Fly 499 PPPLGAHVHHGPNGPFPSVPTPPSKITLFVGKQKFVGIGRTLQQAKHDAAARALQVLKTQAI--- 560
Fly 561 ------SASEEALEDSMDEGDKKSPISQVHEIGIKRNMTVHFKVLREEGPAHMKNFITACIVGSI 619
Fly 620 VTEGEGNGKKVSKKRAAEKMLVELQKLPPLTPTKQTPLKRIKVKTPGKSGAAAREGSVVSGTDGP 684
Fly 685 TQTGKPERRKRLNPPKDKLIDMDDADNPITKLIQLQQTRKEKEPIFELIAKNGNETARRREFVME 749
Fly 750 VSASGSTARGTGNSKKLAKRNAAQALFELLEAVQVTPTNETQSSEECSTSATMSAVTAPAVEATA 814
Fly 815 EGKVPMVATPVGPMPGILILRQNKKPAKKRDQIVIVKSNVESKEEEANKEVAVAAEENSNNSANS 879
Fly 880 G-----DSSNSSSGDSQA--TEAASESALNTSTGSNTSGVSSNSSNVGANTDGNNHAESKNNTES 937
Fly 938 SSNSTSNTQSAGVHM-------KEQLLYLSKLLDFEVNFSDYPKGNHNEFLTIVTLSTHPPQICH 995
Fly 996 GVGKSSEESQNDAASNALKILSKLGLNN 1023 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
stau | NP_476751.1 | DSRM | 312..375 | CDD:214634 | 40/85 (47%) |
DSRM | <529..555 | CDD:294045 | 17/25 (68%) | ||
DSRM | 579..644 | CDD:214634 | 37/64 (58%) | ||
DSRM | 712..780 | CDD:214634 | 34/67 (51%) | ||
Staufen_C | <953..1020 | CDD:293091 | 31/66 (47%) | ||
stau1 | XP_012827226.2 | DSRM_SF | 78..154 | CDD:412133 | 33/75 (44%) |
DSRM_STAU1_rpt2 | 200..264 | CDD:380710 | 28/132 (21%) | ||
DSRM_STAU1_rpt3 | 301..367 | CDD:380712 | 38/65 (58%) | ||
DSRM_STAU1_rpt4 | 394..474 | CDD:380714 | 37/102 (36%) | ||
Staufen_C | 565..675 | CDD:374568 | 37/121 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 76 | 1.000 | Domainoid score | I8790 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 300 | 1.000 | Inparanoid score | I2644 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D355202at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002435 | |
OrthoInspector | 1 | 1.000 | - | - | otm49185 | |
Panther | 1 | 1.100 | - | - | O | PTHR46054 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1848 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.160 |