DRSC/TRiP Functional Genomics Resources

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Protein Alignment stau and ilf3

DIOPT Version :10

Sequence 1:NP_476751.1 Gene:stau / 37065 FlyBaseID:FBgn0003520 Length:1026 Species:Drosophila melanogaster
Sequence 2:XP_012808546.1 Gene:ilf3 / 448121 XenbaseID:XB-GENE-494367 Length:908 Species:Xenopus tropicalis


Alignment Length:321 Identity:71/321 - (22%)
Similarity:117/321 - (36%) Gaps:96/321 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 GQRPFPPKFPSRFALPPPLGAHVHHGPNGPFPSVPTPPSKITLFVGKQKFVGIGRTLQQAKHDAA 548
            |..|.|.|.|.:..:..|...:          :|..|||                          
 Frog   335 GMDPLPTKIPKKTKVETPTIDY----------TVQIPPS-------------------------- 363

  Fly   549 ARALQVLKTQAISASEEALEDSMDEGDKKSPISQVHEIGIKRNMT------------------VH 595
                   .|.|:.|.:..:|   ::|:.|||..:..:|..|...:                  :.
 Frog   364 -------TTYAMPALKRPME---EDGEDKSPSKKKKKIQKKDEKSEPPQAMNALMRLNQLKPGLQ 418

  Fly   596 FKVLREEGPAHMKNFITACIVGSIVTEGEGNGKKVSKKRAAEKMLVEL-------QKLPPLTPTK 653
            :|::.:.||.|...|..:..|.....|..|..||.:|...|.|:|.::       :|......::
 Frog   419 YKLISQTGPVHAPIFTMSVEVDEKTFEASGPSKKTAKLHVAVKVLQDMGLPTGMEEKEEATDESE 483

  Fly   654 QTPLKRIKVKTPGKSGAAAREGSVVSGTDGPTQTGKPERRKRLNPPKDKLIDMDDADNPITKLIQ 718
            |.|:    |:||.:...:.:..|.....:...|.| |...|.             ..||:.:|.:
 Frog   484 QKPV----VQTPAQPADSTQTDSAADQAESAKQQG-PILTKH-------------GKNPVMELNE 530

  Fly   719 LQQTRKEKEPIFELIAKNGNETARRREFVMEVSASGSTARGTGNSKKLAKRNAAQALFELL 779
            .::..|     :|||::.|....:|  |||||...|...:|:|::||:||..||.|..|.|
 Frog   531 KRRGLK-----YELISETGGSHDKR--FVMEVEVDGVKFQGSGSNKKVAKAYAALAALEKL 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stauNP_476751.1 DSRM_STAU_rpt1 311..373 CDD:380686
DSRM_STAU_rpt2 473..553 CDD:380687 10/68 (15%)
DSRM_STAU_rpt3 579..643 CDD:380688 17/81 (21%)
DSRM_STAU_rpt4 711..780 CDD:380689 26/69 (38%)
DSRM_STAU_rpt5 952..1019 CDD:380690
ilf3XP_012808546.1 DZF 88..342 CDD:128842 3/6 (50%)
DSRM_ILF3_rpt1 399..471 CDD:380739 14/71 (20%)
DSRM_ILF3_rpt2 516..587 CDD:380741 27/89 (30%)
DLL_N 838..899 CDD:463567
Blue background indicates that the domain is not in the aligned region.

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