Protein Alignment stau and stau2

DIOPT Version :10

• Sequence 1: NP_476751.1
• Gene: stau / 37065
• FlyBaseID: FBgn0003520
• Length: 1026
• Species: Drosophila melanogaster
• Sequence 2: XP_021325790.1
• Gene: stau2 / 393899
• ZFINID: ZDB-GENE-040426-687
• Length: 684
• Species: Danio rerio
• Alignment Length: 833
• Identity: 255/833 - (30%)
• Similarity: 346/833 - (41%)
• Gaps: 245/833 - (29%)

  Fly   230 VQEVTPVPEPPVTT----------NNATTNSTSNSTVIASEPVTQEDTSQKPETRQEPASADDHV 284
            ||...|:..|.:|.          ...:...|.|.||.|:.|           |...|||
Zfish     6 VQTSAPLSGPGLTAVAPAVAMPSPGALSLQPTINGTVPATTP-----------TCPSPAS----- 54

  Fly   285 STGNIDATGALSNEDTSSSGRGG-KDKTPMCLVNELARYNKITHQYRLTEERGPAHCKTFTVTLM 348
              |.:|:|...|........... |:||||||||||||:|:|..||:|..|:||||.|.|||.|.
Zfish    55 --GFVDSTVPASPSGPPQENMANPKEKTPMCLVNELARFNRIQPQYKLLNEKGPAHAKIFTVQLC 117

  Fly   349 LGDEEYSADGFKIKKAQHLAASKAIEETMYKHPPPKIRRSEEGGPMRTHITPTVELNALAMKLGQ 413
            ||::.:.::|..||||||..|:||:.|:....|||:..:::......: ||||||||.||||.|:
Zfish   118 LGNQVWESEGSSIKKAQHSTATKALAESSLPRPPPRSPKADSNSNPGS-ITPTVELNGLAMKRGE 181

  Fly   414 RTFYLLDPTQIPPTDSIVPPEFAGGHLLTAPGPGMPQPPPPPAYALRQRLGNGFVPIPSQPMHPH 478
            ...|       .|.|                      |.|.|.|...                 :
Zfish   182 PAIY-------RPLD----------------------PKPIPNYRAN-----------------Y 200

  Fly   479 FFHGPGQRPFPPKFPSRFALPPPLGAHVHHGPNGPFPSVPTPPSKITLFVGKQKFVGIGRTLQQA 543
            .|.|        .|..|:..|.|...:|.                  |.||..:|:|.|||.|.|
Zfish   201 NFRG--------MFNQRYHYPVPKVFYVQ------------------LTVGNNEFIGEGRTRQAA 239

  Fly   544 KHDAAARALQVLKTQAI-----SASEEALEDSMDEGDKKSPISQVHEIGIKRNMTVHFKVLREEG 603
            :|:||.:|||.||.:.|     ..|||..|...:....||.||.|:||.:|||:.|:|:||:|.|
Zfish   240 RHNAAMKALQALKNEPIPERPPQCSEEKKETEENSDASKSEISLVYEIALKRNLPVNFEVLKESG 304

  Fly   604 PAHMKNFITACIVGSIVTEGEGNGKKVSKKRAAEKMLVELQKLPPLTPTKQTPLKRIK--VKTPG 666
            |.|||:|:|...||....|||||.||:||||||..:|.||:|||.| |..:.|....|  .||..
Zfish   305 PPHMKSFLTRVTVGEFSAEGEGNSKKLSKKRAALSILQELKKLPVL-PVVEKPKVHYKKRPKTIL 368

  Fly   667 KSGAAAREGSVVSGTDGPTQTGKPERRKRLNPPKDKLIDMDDADNPITKLIQLQQTRKEKEPIFE 731
            |:|....:|.                                  |||::|.|:||.:|||||.:.
Zfish   369 KTGPEYGQGM----------------------------------NPISRLAQIQQAKKEKEPEYM 399

  Fly   732 LIAKNGNETARRREFVMEVSASGSTARGTGNSKKLAKRNAAQALFELLEAVQVTPTNETQSSEEC 796
            |:::.|  ..|||||:|:|........|||.:||:||||||:|:.             .|...:.
Zfish   400 LLSERG--MPRRREFIMQVKVGTEVTTGTGPNKKVAKRNAAEAML-------------LQLGYKA 449

  Fly   797 STSATMSAVTAPAVEATAEGKVPMVATPVGPMPGILILRQNKKPAKKRDQIVIVKSNVESKEEEA 861
            ||                    |:..||                                 |:..
Zfish   450 ST--------------------PLQNTP---------------------------------EKMD 461

  Fly   862 NKEVAVAAEENSNNSANSGDSSNSSSGDSQATEAASESALNTSTGSNTSGVSSN---SSNVGANT 923
            ||      ..|...:|....:||:..|....:....:. :..|......|...|   :..:|..:
Zfish   462 NK------GWNGQRAAFPETTSNTQKGILHLSPDVYQE-MEASRNKGVPGAPGNFPTAKEIGQGS 519

  Fly   924 DGNNHAESKNNT-----ESSSNSTSNTQSA-------------GVHMKEQLLYLSKLLDFEVNFS 970
            .|.....|..||     |...:.||.|..|             .:...:||.||:.:..|:|.:|
Zfish   520 AGPFCTPSVGNTATIAKELLLSGTSPTAEALVLKGKAPALACGSIQPSQQLEYLAHIQGFQVQYS 584

  Fly   971 DYPKGNHNEFLTIVTLSTHPPQIC-HGVGKSSEESQNDAASNALKILSKLGLN 1022
            |  :....||:|.:|||  |.|:. ||:|.|...|.:.||.:|||.||:.||:
Zfish   585 D--RQTDKEFMTYLTLS--PVQMTFHGIGSSIPASHDQAALSALKQLSEQGLD 633

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
stau	NP_476751.1	DSRM_STAU_rpt1	311..373	CDD:380686	37/61 (61%)
		DSRM_STAU_rpt2	473..553	CDD:380687	21/79 (27%)
		DSRM_STAU_rpt3	579..643	CDD:380688	36/63 (57%)
		DSRM_STAU_rpt4	711..780	CDD:380689	33/68 (49%)
		DSRM_STAU_rpt5	952..1019	CDD:380690	28/67 (42%)
stau2	XP_021325790.1	DSRM_STAU2_rpt1	75..142	CDD:380709	39/66 (59%)
		DSRM_STAU2_rpt2	170..251	CDD:380711	39/152 (26%)
		DSRM_STAU2_rpt3	278..344	CDD:380713	38/65 (58%)
		DSRM_STAU2_rpt4	376..461	CDD:380715	41/186 (22%)
		Staufen_C	526..631	CDD:465131	36/108 (33%)