Sequence 1: | NP_476751.1 | Gene: | stau / 37065 | FlyBaseID: | FBgn0003520 | Length: | 1026 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021325790.1 | Gene: | stau2 / 393899 | ZFINID: | ZDB-GENE-040426-687 | Length: | 684 | Species: | Danio rerio |
Alignment Length: | 833 | Identity: | 255/833 - (30%) |
---|---|---|---|
Similarity: | 346/833 - (41%) | Gaps: | 245/833 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 230 VQEVTPVPEPPVTT----------NNATTNSTSNSTVIASEPVTQEDTSQKPETRQEPASADDHV 284
Fly 285 STGNIDATGALSNEDTSSSGRGG-KDKTPMCLVNELARYNKITHQYRLTEERGPAHCKTFTVTLM 348
Fly 349 LGDEEYSADGFKIKKAQHLAASKAIEETMYKHPPPKIRRSEEGGPMRTHITPTVELNALAMKLGQ 413
Fly 414 RTFYLLDPTQIPPTDSIVPPEFAGGHLLTAPGPGMPQPPPPPAYALRQRLGNGFVPIPSQPMHPH 478
Fly 479 FFHGPGQRPFPPKFPSRFALPPPLGAHVHHGPNGPFPSVPTPPSKITLFVGKQKFVGIGRTLQQA 543
Fly 544 KHDAAARALQVLKTQAI-----SASEEALEDSMDEGDKKSPISQVHEIGIKRNMTVHFKVLREEG 603
Fly 604 PAHMKNFITACIVGSIVTEGEGNGKKVSKKRAAEKMLVELQKLPPLTPTKQTPLKRIK--VKTPG 666
Fly 667 KSGAAAREGSVVSGTDGPTQTGKPERRKRLNPPKDKLIDMDDADNPITKLIQLQQTRKEKEPIFE 731
Fly 732 LIAKNGNETARRREFVMEVSASGSTARGTGNSKKLAKRNAAQALFELLEAVQVTPTNETQSSEEC 796
Fly 797 STSATMSAVTAPAVEATAEGKVPMVATPVGPMPGILILRQNKKPAKKRDQIVIVKSNVESKEEEA 861
Fly 862 NKEVAVAAEENSNNSANSGDSSNSSSGDSQATEAASESALNTSTGSNTSGVSSN---SSNVGANT 923
Fly 924 DGNNHAESKNNT-----ESSSNSTSNTQSA-------------GVHMKEQLLYLSKLLDFEVNFS 970
Fly 971 DYPKGNHNEFLTIVTLSTHPPQIC-HGVGKSSEESQNDAASNALKILSKLGLN 1022 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
stau | NP_476751.1 | DSRM | 312..375 | CDD:214634 | 37/62 (60%) |
DSRM | <529..555 | CDD:294045 | 14/25 (56%) | ||
DSRM | 579..644 | CDD:214634 | 37/64 (58%) | ||
DSRM | 712..780 | CDD:214634 | 32/67 (48%) | ||
Staufen_C | <953..1020 | CDD:293091 | 28/67 (42%) | ||
stau2 | XP_021325790.1 | DSRM | 81..142 | CDD:214634 | 36/60 (60%) |
DSRM | 168..252 | CDD:214634 | 41/155 (26%) | ||
DSRM | 281..345 | CDD:214634 | 37/63 (59%) | ||
DSRM | 380..446 | CDD:214634 | 33/80 (41%) | ||
Staufen_C | 526..631 | CDD:318642 | 36/108 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 85 | 1.000 | Domainoid score | I8139 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3732 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 312 | 1.000 | Inparanoid score | I2565 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D355202at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002435 | |
OrthoInspector | 1 | 1.000 | - | - | otm25904 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_108158 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR46054 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4772 |
SonicParanoid | 1 | 1.000 | - | - | X1848 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.860 |