Sequence 1: | NP_476751.1 | Gene: | stau / 37065 | FlyBaseID: | FBgn0003520 | Length: | 1026 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001157852.1 | Gene: | STAU2 / 27067 | HGNCID: | 11371 | Length: | 570 | Species: | Homo sapiens |
Alignment Length: | 680 | Identity: | 214/680 - (31%) |
---|---|---|---|
Similarity: | 299/680 - (43%) | Gaps: | 187/680 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 308 KDKTPMCLVNELARYNKITHQYRLTEERGPAHCKTFTVTLMLGDEEYSADGFKIKKAQHLAASKA 372
Fly 373 IEETMYKHP---PPKIRRSEEGGPMRTHITPTVELNALAMKLGQRTFYLLDPTQIPPTDSIVPPE 434
Fly 435 FAGGHLLTAPGPGMPQPPPPPAYALRQRLGNGFVPIPSQPMHPHFFHGPGQRPFPPKFPSRFALP 499
Fly 500 PPLGAHVHHGPNGPFPSVPTPPSKITLFVGKQKFVGIGRTLQQAKHDAAARALQVLKTQAI---- 560
Fly 561 SASEEALEDSMDEGD-KKSPISQVHEIGIKRNMTVHFKVLREEGPAHMKNFITACIVGSIVTEGE 624
Fly 625 GNGKKVSKKRAAEKMLVELQKLPPLTPTKQTP---LKRIKVKTPGKSGAAAREGSVVSGTDGPTQ 686
Fly 687 TGKPERRKRLNPPKDKLIDMDDADNPITKLIQLQQTRKEKEPIFELIAKNGNETARRREFVMEVS 751
Fly 752 ASGSTARGTGNSKKLAKRNAAQALFELLEAVQVTPTNETQSSEECSTSATMSAVTAPAVEATAEG 816
Fly 817 KVPMVATPVGPMPGILILRQNKKPAKKRDQIVIVKSNVESKEEEANKEVAVAA------EENSNN 875
Fly 876 SANSGDSSNSSSGDSQATEAASESALNTSTGSNTSGVSSNSSNVGANTDGNNHAESKNNTESSSN 940
Fly 941 STSNTQSAGVHMKEQLLYLSKLLDFEVNFS 970 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
stau | NP_476751.1 | DSRM | 312..375 | CDD:214634 | 34/62 (55%) |
DSRM | <529..555 | CDD:294045 | 13/25 (52%) | ||
DSRM | 579..644 | CDD:214634 | 37/64 (58%) | ||
DSRM | 712..780 | CDD:214634 | 34/67 (51%) | ||
Staufen_C | <953..1020 | CDD:293091 | 6/18 (33%) | ||
STAU2 | NP_001157852.1 | DSRM | 9..70 | CDD:214634 | 33/60 (55%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 71..94 | 6/26 (23%) | |||
DSRM | 96..180 | CDD:214634 | 39/155 (25%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 181..203 | 4/21 (19%) | |||
DSRM | 209..273 | CDD:214634 | 37/63 (59%) | ||
Nuclear localization signal 1. /evidence=ECO:0000250 | 273..291 | 8/19 (42%) | |||
DSRM | 308..374 | CDD:214634 | 35/69 (51%) | ||
Nuclear localization signal 2. /evidence=ECO:0000250 | 373..412 | 9/66 (14%) | |||
Required for dendritic transport. /evidence=ECO:0000250 | 381..570 | 33/188 (18%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 387..409 | 6/49 (12%) | |||
Staufen_C | 459..523 | CDD:318642 | 18/82 (22%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 528..570 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 76 | 1.000 | Domainoid score | I8972 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3732 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 279 | 1.000 | Inparanoid score | I2915 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S6775 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D355202at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002435 | |
OrthoInspector | 1 | 1.000 | - | - | otm41961 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_108158 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR46054 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4772 |
SonicParanoid | 1 | 1.000 | - | - | X1848 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.810 |