DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stau and STAU2

DIOPT Version :9

Sequence 1:NP_476751.1 Gene:stau / 37065 FlyBaseID:FBgn0003520 Length:1026 Species:Drosophila melanogaster
Sequence 2:NP_001157852.1 Gene:STAU2 / 27067 HGNCID:11371 Length:570 Species:Homo sapiens


Alignment Length:680 Identity:214/680 - (31%)
Similarity:299/680 - (43%) Gaps:187/680 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 KDKTPMCLVNELARYNKITHQYRLTEERGPAHCKTFTVTLMLGDEEYSADGFKIKKAQHLAASKA 372
            |:||.|||||||||:|::..||:|..||||||.|.|:|.|.||::.:.::|..|||||...|:||
Human     5 KEKTAMCLVNELARFNRVQPQYKLLNERGPAHSKMFSVQLSLGEQTWESEGSSIKKAQQAVANKA 69

  Fly   373 IEETMYKHP---PPKIRRSEEGGPMRTHITPTVELNALAMKLGQRTFYLLDPTQIPPTDSIVPPE 434
            :.|:....|   |||...:...|    .||||||||.||||.|:...|       .|.|      
Human    70 LTESTLPKPVQKPPKSNVNNNPG----SITPTVELNGLAMKRGEPAIY-------RPLD------ 117

  Fly   435 FAGGHLLTAPGPGMPQPPPPPAYALRQRLGNGFVPIPSQPMHPHFFHGPGQRPFPPKFPSRFALP 499
                            |.|.|.|    |....|     :.|:...:|.|..:.|           
Human   118 ----------------PKPFPNY----RANYNF-----RGMYNQRYHCPVPKIF----------- 146

  Fly   500 PPLGAHVHHGPNGPFPSVPTPPSKITLFVGKQKFVGIGRTLQQAKHDAAARALQVLKTQAI---- 560
                                   .:.|.||..:|.|.|:|.|.|:|:||.:|||.|:.:.|    
Human   147 -----------------------YVQLTVGNNEFFGEGKTRQAARHNAAMKALQALQNEPIPERS 188

  Fly   561 SASEEALEDSMDEGD-KKSPISQVHEIGIKRNMTVHFKVLREEGPAHMKNFITACIVGSIVTEGE 624
            ..:.|:.:|..|:.| .||.||.|.||.:||||.|.|:|::|.||.|||:|:|...||....|||
Human   189 PQNGESGKDVDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGE 253

  Fly   625 GNGKKVSKKRAAEKMLVELQKLPPLTPTKQTP---LKRIKVKTPGKSGAAAREGSVVSGTDGPTQ 686
            ||.||:||||||..:|.||:||||| |..:.|   .|: :.||..|:|....:|.          
Human   254 GNSKKLSKKRAATTVLQELKKLPPL-PVVEKPKLFFKK-RPKTIVKAGPEYGQGM---------- 306

  Fly   687 TGKPERRKRLNPPKDKLIDMDDADNPITKLIQLQQTRKEKEPIFELIAKNGNETARRREFVMEVS 751
                                    |||::|.|:||.:|||||.:.|:::.|  ..|||||||:|.
Human   307 ------------------------NPISRLAQIQQAKKEKEPDYVLLSERG--MPRRREFVMQVK 345

  Fly   752 ASGSTARGTGNSKKLAKRNAAQALFELLEAVQVTPTNETQSSEECSTSATMSAVTAPAVEATAEG 816
            .....|.|||.:||:||:|||:|:  ||:......||.....|:...:...|             
Human   346 VGNEVATGTGPNKKIAKKNAAEAM--LLQLGYKASTNLQDQLEKTGENKGWS------------- 395

  Fly   817 KVPMVATPVGPMPGILILRQNKKPAKKRDQIVIVKSNVESKEEEANKEVAVAA------EENSNN 875
                     ||.||.      .:|.....:.::..|....:|.||::...::.      .....|
Human   396 ---------GPKPGF------PEPTNNTPKGILHLSPDVYQEMEASRHKVISGTTLGYLSPKDMN 445

  Fly   876 SANSGDSSNSSSGDSQATEAASESALNTSTGSNTSGVSSNSSNVGANTDGNNHAESKNNTESSSN 940
            ..:|...|.|.:.:|.|| .|.|..:|        |.||.:..:|.                 ..
Human   446 QPSSSFFSISPTSNSSAT-IARELLMN--------GTSSTAEAIGL-----------------KG 484

  Fly   941 STSNTQSAGVHMKEQLLYLSKLLDFEVNFS 970
            |:.....:.|...:||.||:::..|:...|
Human   485 SSPTPPCSPVQPSKQLEYLARIQGFQAALS 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stauNP_476751.1 DSRM 312..375 CDD:214634 34/62 (55%)
DSRM <529..555 CDD:294045 13/25 (52%)
DSRM 579..644 CDD:214634 37/64 (58%)
DSRM 712..780 CDD:214634 34/67 (51%)
Staufen_C <953..1020 CDD:293091 6/18 (33%)
STAU2NP_001157852.1 DSRM 9..70 CDD:214634 33/60 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 71..94 6/26 (23%)
DSRM 96..180 CDD:214634 39/155 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..203 4/21 (19%)
DSRM 209..273 CDD:214634 37/63 (59%)
Nuclear localization signal 1. /evidence=ECO:0000250 273..291 8/19 (42%)
DSRM 308..374 CDD:214634 35/69 (51%)
Nuclear localization signal 2. /evidence=ECO:0000250 373..412 9/66 (14%)
Required for dendritic transport. /evidence=ECO:0000250 381..570 33/188 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 387..409 6/49 (12%)
Staufen_C 459..523 CDD:318642 18/82 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 528..570
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 76 1.000 Domainoid score I8972
eggNOG 1 0.900 - - E1_KOG3732
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 279 1.000 Inparanoid score I2915
Isobase 1 0.950 - 0 Normalized mean entropy S6775
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D355202at33208
OrthoFinder 1 1.000 - - FOG0002435
OrthoInspector 1 1.000 - - otm41961
orthoMCL 1 0.900 - - OOG6_108158
Panther 1 1.100 - - LDO PTHR46054
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4772
SonicParanoid 1 1.000 - - X1848
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.810

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