Sequence 1: | NP_476751.1 | Gene: | stau / 37065 | FlyBaseID: | FBgn0003520 | Length: | 1026 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006256337.1 | Gene: | Adarb1 / 25367 | RGDID: | 2033 | Length: | 775 | Species: | Rattus norvegicus |
Alignment Length: | 584 | Identity: | 113/584 - (19%) |
---|---|---|---|
Similarity: | 177/584 - (30%) | Gaps: | 221/584 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 249 NSTSNSTVIASEPVTQEDTSQKPETRQEPASADD-HVSTGNIDATGALSNEDTSSSGRGGKDK-- 310
Fly 311 --------TPMCLVNELARYNKITH--QYRLTEERGPAHCKTFTVTLMLGDEEYSADGFKIKKAQ 365
Fly 366 HLAASKAIEETMYKHPPPKIRRSEEGGPMRTHITPTVELNALAMKLGQRTFYLLDPTQIPPT--- 427
Fly 428 -----DSIVPPEFAGGH------------LLTAPGP-GMPQPPPPPAYALRQRLGNGFVPIPSQP 474
Fly 475 MHPHFFHGPGQRPFPPKFPSRFALPPPLGAHVHHGPNGPFPSVPTPPSKITLFVGKQKFVGIGRT 539
Fly 540 LQQAKHDAAARALQVLKTQAISASEEALEDSMDEGDKKSPISQVHEI--GIKRNMTVHFKVLREE 602
Fly 603 GPAHMKNFITACIVGSIVTEGEGNGKKVSKKRAAEKML--------------------------- 640
Fly 641 ---------VELQKLPPLTPTKQTPLKRIK-----VKTPGKSGAAAREGSVVSGTDGPTQTGKPE 691
Fly 692 RRKRLNPPKDKLIDMDDADNPITKLIQLQQTRKE--KEPIFELIAKNGNETARRREFVMEVSAS 753 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
stau | NP_476751.1 | DSRM | 312..375 | CDD:214634 | 20/64 (31%) |
DSRM | <529..555 | CDD:294045 | 0/25 (0%) | ||
DSRM | 579..644 | CDD:214634 | 21/102 (21%) | ||
DSRM | 712..780 | CDD:214634 | 10/44 (23%) | ||
Staufen_C | <953..1020 | CDD:293091 | |||
Adarb1 | XP_006256337.1 | DSRM | 143..206 | CDD:238007 | 19/63 (30%) |
DSRM | 299..357 | CDD:238007 | 20/63 (32%) | ||
ADEAMc | 386..772 | CDD:214718 | 29/128 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |