| Sequence 1: | NP_476751.1 | Gene: | stau / 37065 | FlyBaseID: | FBgn0003520 | Length: | 1026 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001103376.1 | Gene: | Stau1 / 20853 | MGIID: | 1338864 | Length: | 495 | Species: | Mus musculus |
| Alignment Length: | 581 | Identity: | 178/581 - (30%) |
|---|---|---|---|
| Similarity: | 255/581 - (43%) | Gaps: | 143/581 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 473 QPMHPH------FFHGPGQRPFPPKFPSRFALPPPLGAHVHHGPNGPFPSVPTPPSKITLFVGKQ 531
Fly 532 KFVGIGRTLQQAKHDAAARALQVLKTQAISASEEALE----DSMDEGDKKSPISQVHEIGIKRNM 592
Fly 593 TVHF------KVLREEGPAHMKNFITACIVGSIVTEGEGNGKKVSKKRAAEKMLVELQKLPPLTP 651
Fly 652 TKQTPLKRIKVKTPGKSGAAAREGSVVSGTDGPTQTGKPERRKRLNPPKDKLIDMDDADNPITKL 716
Fly 717 IQLQQTRKEKEPIFELIAKNGNETARRREFVMEVSASGSTARGTGNSKKLAKRNAAQALFELL-- 779
Fly 780 EAVQVTPTNETQSSEECSTSATMSAVTAPAVEATAEGKVPMVATPVGPMPGILILRQNKKPAKKR 844
Fly 845 DQIVIVKSNVESKEEEANKEVAVAAEENSNNSANSG-----DSSNSSSGDSQA------TEAASE 898
Fly 899 SALNTSTGSNT-----SGVSSNSSNVGANTDGNNHAESKNNTESSSNSTSNTQSAGVHMKEQLLY 958
Fly 959 LSKLLDFEVNFSDYPKGNHNEFLTIVTLSTHPPQICHGVGKSSEESQNDAASNALKILSKL 1019 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| stau | NP_476751.1 | DSRM | 312..375 | CDD:214634 | |
| DSRM | <529..555 | CDD:294045 | 13/25 (52%) | ||
| DSRM | 579..644 | CDD:214634 | 37/70 (53%) | ||
| DSRM | 712..780 | CDD:214634 | 35/69 (51%) | ||
| Staufen_C | <953..1020 | CDD:293091 | 30/67 (45%) | ||
| Stau1 | NP_001103376.1 | DSRM | 98..167 | CDD:214634 | 37/68 (54%) |
| DSRM | 204..270 | CDD:238007 | 35/67 (52%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 278..318 | 12/78 (15%) | |||
| Staufen_C | 366..475 | CDD:293091 | 37/124 (30%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 77 | 1.000 | Domainoid score | I8845 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG3732 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D355202at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002435 | |
| OrthoInspector | 1 | 1.000 | - | - | otm44010 | |
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR46054 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4772 |
| SonicParanoid | 1 | 1.000 | - | - | X1848 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 12 | 11.910 | |||||