Protein Alignment stau and Adarb1

DIOPT Version :9

• Sequence 1: NP_476751.1
• Gene: stau / 37065
• FlyBaseID: FBgn0003520
• Length: 1026
• Species: Drosophila melanogaster
• Sequence 2: XP_006513125.1
• Gene: Adarb1 / 110532
• MGIID: 891999
• Length: 775
• Species: Mus musculus
• Alignment Length: 584
• Identity: 114/584 - (19%)
• Similarity: 177/584 - (30%)
• Gaps: 221/584 - (37%)

  Fly   249 NSTSNSTVIASEPVTQEDTSQKPETRQEPASADD-HVSTGNIDATGALSNEDTSSSGRGGKDK-- 310
            |.:|:||.|..   .:...:..|:....|...:. .:|.|   ..|:.|.:.....|..|..|
Mouse    72 NMSSSSTDIKE---NRNLDNMPPKDSSTPGPGEGIPLSNG---GGGSTSRKRPLEEGSNGHSKYR 130

  Fly   311 --------TPMCLVNELARYNKITH--QYRLTEERGPAHCKTFTVTLMLGDEEYSADGFKIKKAQ 365
                    .|:...|.|.:.|:|..  ||.|..:.||.|...|.:::.:..:.:...|...|||:
Mouse   131 LKKRRKTPGPVLPKNALMQLNEIKPGLQYMLLSQTGPVHAPLFVMSVEVNGQVFEGSGPTKKKAK 195

  Fly   366 HLAASKAIEETMYKHPPPKIRRSEEGGPMRTHITPTVELNALAMKLGQRTFYLLDPTQIPPT--- 427
            ..||.||: .:..:.|    ..||      .|:       |:...|...|.:..|....|.|
Mouse   196 LHAAEKAL-RSFVQFP----NASE------AHL-------AMGRTLSVNTDFTSDQADFPDTLFN 242

  Fly   428 -----DSIVPPEFAGGH------------LLTAPGP-GMPQPPPPPAYALRQRLGNGFVPIPSQP 474
                 |...||.:.|.:            |..:|.| .:.|||               :|||.
Mouse   243 GFETPDKSEPPFYVGSNGDDSFSSSGDVSLSASPVPASLTQPP---------------LPIPP-- 290

  Fly   475 MHPHFFHGPGQRPFPPKFPSRFALPPPLGAHVHHGPNGPFPSVPTPPSKITLFVGKQKFVGIGRT 539
                        ||||                   |:|
Mouse   291 ------------PFPP-------------------PSG--------------------------- 297

  Fly   540 LQQAKHDAAARALQVLKTQAISASEEALEDSMDEGDKKSPISQVHEI--GIKRNMTVHFKVLREE 602
                                                 |:|:..::|:  |:|      :..|.|.
Mouse   298 -------------------------------------KNPVMILNELRPGLK------YDFLSES 319

  Fly   603 GPAHMKNFITACIVGSIVTEGEGNGKKVSKKRAAEKML--------------------------- 640
            |.:|.|:|:.:.:|.....||.|..||::|.|||:..|
Mouse   320 GESHAKSFVMSVVVDGQFFEGSGRNKKLAKARAAQSALATVFNLHLDQTPSRQPVLSEGLQLHLP 384

  Fly   641 ---------VELQKLPPLTPTKQTPLKRIK-----VKTPGKSGAAAREGSVVSGTDGPTQTGKPE 691
                     :.|.|...||....:|..|.|     |.|.|.....|:..||.:||.........:
Mouse   385 QVLADAVSRLVLGKFSDLTDNFSSPHARRKVLSGVVMTTGTDVKDAKVISVSTGTKCINGEYMSD 449

  Fly   692 RRKRLNPPKDKLIDMDDADNPITKLIQLQQTRKE--KEPIFELIAKNGNETARRREFVMEVSAS 753
            |...||....::|........:...::|....||  |:.||:...:.|.......:|.:.:|.|
Mouse   450 RGLALNDCHAEIISRRSLLRFLYAQLELYLNNKEDQKKSIFQKSERGGFRLKDTVQFHLYISTS 513

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
stau	NP_476751.1	DSRM	312..375	CDD:214634	20/64 (31%)
		DSRM	<529..555	CDD:294045	0/25 (0%)
		DSRM	579..644	CDD:214634	21/102 (21%)
		DSRM	712..780	CDD:214634	10/44 (23%)
		Staufen_C	<953..1020	CDD:293091
Adarb1	XP_006513125.1	DSRM_RED1_rpt1	139..210	CDD:380724	20/71 (28%)
		DSRM_RED1_rpt2	296..365	CDD:380727	23/138 (17%)
		ADEAMc	386..772	CDD:214718	29/128 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910