DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5098 and phf6

DIOPT Version :9

Sequence 1:NP_001261066.1 Gene:CG5098 / 37063 FlyBaseID:FBgn0034300 Length:1339 Species:Drosophila melanogaster
Sequence 2:XP_021336655.1 Gene:phf6 / 327070 ZFINID:ZDB-GENE-030131-5278 Length:376 Species:Danio rerio


Alignment Length:270 Identity:56/270 - (20%)
Similarity:92/270 - (34%) Gaps:88/270 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1093 CDEYRAAVQTPGAQDIDGMFVNK------------RRREDMVKGQERNLPAVPATLANIMQAPKI 1145
            |.::|.|.| .|:.|..|:..|.            |..:..::|..|.                 
Zfish   139 CRKHRDASQ-DGSDDEQGVAANDSDSSPPRSRGRGRFEKSRIRGVSRG----------------- 185

  Fly  1146 SMHKRKRKQTHDSSISYSDD---------------PNESRSQCSSVDLLDCSTESKFVETFRGMG 1195
                 :...|..:|...:||               |.:|..:|..     |....:..|| ||: 
Zfish   186 -----QSDDTRSTSSQGNDDTESSSHRDRSPLRGSPGDSGLRCGF-----CHAGEEENET-RGV- 238

  Fly  1196 KTSENGFEVWLHEDCAVWSN----------------DIHLIGAHVNGLDAAVWDSTRYQCVLCQQ 1244
            ..|:|..:|..|..|.::|:                ||..:...:.       ...|.:|.||.|
Zfish   239 LHSDNAKKVAAHYKCMLFSSGTVQLTTSSRAEFGNFDIKTVIQEIK-------RGKRMKCTLCAQ 296

  Fly  1245 TGASICCFQRCCKAAAHVPCG--RSANW--SLSEEDRKVYCHLHR-HEPGVVEPIKTESIAPVEV 1304
            .||:|.|..:.|....|..||  ..|.:  :::....|:||..|. :|....|..:.||.:..:.
Zfish   297 LGATIGCEIKACVKTYHYHCGLQDKAKYIENMARGIYKLYCKNHSGNEERDEEDEERESRSREKA 361

  Fly  1305 SV---ATPPA 1311
            ::   |.||:
Zfish   362 AIDNRADPPS 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5098NP_001261066.1 PHD_SF 1068..1284 CDD:304600 48/237 (20%)
phf6XP_021336655.1 PHD_SF 15..142 CDD:328929 1/2 (50%)
ePHD2_PHF6 223..340 CDD:277181 31/130 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.