DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5098 and Rai1

DIOPT Version :9

Sequence 1:NP_001261066.1 Gene:CG5098 / 37063 FlyBaseID:FBgn0034300 Length:1339 Species:Drosophila melanogaster
Sequence 2:NP_001032853.1 Gene:Rai1 / 19377 MGIID:103291 Length:1889 Species:Mus musculus


Alignment Length:1743 Identity:349/1743 - (20%)
Similarity:534/1743 - (30%) Gaps:615/1743 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 HLSQAAQNASWNPLQIPSYIPRQPQLAHMSNERPGMVRSPLAWHV-------SGTVSAQPPPPPD 68
            |..|..|          .|.|  |..|..:.|:.....||.:.|.       |.:.|:.|.|...
Mouse   296 HYGQQGQ----------GYCP--PDTAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMP 348

  Fly    69 AIYNFMSANHK---------NLDHHHQMNPLLAP----------PYSGT--------LPFNSM-D 105
            .:.||..:...         ..||.|.| |||.|          |.:|.        ||.|.: |
Mouse   349 NLENFPYSQQPLSTGAFPTGITDHSHFM-PLLNPSPTDAASSVDPQAGNCKPLQKEKLPDNLLSD 412

  Fly   106 LSLQSARSAAQPLAKQPPNQQPHQTQQQQQSLIHAPNYPSIQNLTTNATPTSTQLQQQQQQEHLA 170
            |||||..:    |..|..|.. :..||...|....|....::||.:. ||      :|.:.:|.:
Mouse   413 LSLQSLTA----LTSQVENIS-NTVQQLLLSKATMPQKKGVKNLVSR-TP------EQHKSQHCS 465

  Fly   171 AMAAAHVSLLQSSRQNQGAPSGNLSNGGDCESLLPPPPPTSVS---------------------- 213
            ...:.:      |.:..|.|            |..||..|..|                      
Mouse   466 PEGSGY------SAEPAGTP------------LSEPPSSTPQSTHAEPQDTDYLSGSEDPLERSF 512

  Fly   214 -------GNTNHTGSNSSS--NSGSNNHIASPHYMQSR-DENFKLTQLKRSFEPDLSGKNPQKEK 268
                   |:.....|||.:  .|.|...:.||..|.:: |::|:  .|..:...|...|....|:
Mouse   513 LYCSQARGSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQ--SLHSTLPLDSFSKFVAGER 575

  Fly   269 D------------------FGYPSA---------SSASKLPTHNVQQQHANKKPSPLRN------ 300
            |                  .|...|         :.||.||..|      .|.|..|.|      
Mouse   576 DCPRLLLSALAQEDLASEILGLQEAIVEKADKAWAEASSLPKDN------GKPPFSLENHGACLD 634

  Fly   301 ------YHQQQQP-----PYNL------------------------TPKYN------------GP 318
                  :.|..:|     |..|                        .||..            |.
Mouse   635 TVAKTSWSQPGEPETLPEPLQLDKGGSTKDFSPGLFEDPSVAFATTDPKKTSSPLSFGTKPLLGT 699

  Fly   319 QTP-PT-------PQSPLAAN---------PHQMLSPTMDYNQLH-------LHHQLNSSSGGSY 359
            .|| ||       |.:|.|::         |.:.|........||       |.....:|.|.. 
Mouse   700 ATPDPTTAAFDCFPDTPTASSVDGANPFAWPEENLGDACPRWGLHPGELTKGLEQGAKASDGVG- 763

  Fly   360 QHMQQDQTQSQSHPQH--LHYHNQHATSQTAPPPLLPPLLTSGQFHAQ---------------PQ 407
                    ::.:|...  :.:...||..:       |....||.|..|               |:
Mouse   764 --------KADAHEASACMGFQEDHAIGK-------PAAALSGDFKQQEAEGVKEEVGGLLQCPE 813

  Fly   408 DASQQQTASSSQHQTHHSRTAQLTNL-DQAVKHKPESEEQ-----PVITDLSYRNSETDKTAANP 466
            .|...|....|:|....:....|..| ....|...|:||:     .::.....|.|..|      
Mouse   814 VAKANQWLEESRHCCSSTDFGDLPLLPPPGRKEDLEAEEEYSSLCELLGSPEQRPSLQD------ 872

  Fly   467 VPEAPESPYLTTSN--EESLESN-------------------SNSSNSRKRRKRKASMVMRVTPN 510
             |.:|::|.:.|..  ||:|::.                   |..:.|:.:...::|: ..:.|.
Mouse   873 -PLSPKAPLMCTKEEAEEALDTKAGWVSPCHLSGEPAVLLGPSVGAQSKVQSWFESSL-SHMKPG 935

  Fly   511 ENAPEGENSKPQHPQQAANLNNSCSPKKS----PKNGGGEFQPFSTQKQSQTEN----------- 560
            |..||.|.:    |..:.....|.:||.:    |:....:.:|....|..::..           
Mouse   936 EEGPEMERA----PGSSGTSQGSLAPKPNKPAVPEGPIAKKEPVPRGKSLRSRRVHRGLPEAEDS 996

  Fly   561 --------------EKTT-----QENGRGGSPAPAENNSN------SNSSTLYNDNENPKTK--- 597
                          |..|     |..|.|   ||....|.      :.|.|..::.:.|...   
Mouse   997 PCRVPALPKDLLLPESCTGPPQGQAEGAG---APGRGLSEGLPRMCTRSLTALSEPQTPGPPGLT 1058

  Fly   598 -----------KQRQALLQRNLTEQHRMQQDDEPPKNHTSPAMPPPSPQSNSSSSSSSSSS---- 647
                       |||.|.       :...:.....||..:||:.|...|.::.||...|.:.    
Mouse  1059 TTPTPPDKLGGKQRAAF-------KSGKRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKEPDS 1116

  Fly   648 --------------ANTHSSQSSHAVNNIPK----PEINNKATTDTPASPALVEQGDIDAKPAVS 694
                          :.|...|..||....|.    |:.  :||...||:..|.....:.:.|...
Mouse  1117 PSMPGKDQRSMVLRSRTKPQQVFHAKRRRPSESRIPDC--RATKKLPANNHLPTAYKVSSGPQKE 1179

  Fly   695 --VHECDEEEEPAV-NKVS--PAHPDPPTTAAVAAPPATESPKKSSPAANSESCPFGEVEDKLEQ 754
              :::..:..:|.. ||:|  |.|.....:|.:|..||    ||.|....|.:...|:..::..:
Mouse  1180 GRMNQRVKVPKPGTGNKLSDRPLHTLKRKSAFMAPVPA----KKRSLILRSNNGSGGDGREERAE 1240

  Fly   755 MFAGIEEETERISSPEK-------------PAEESAAMVAHNLTAQL-------ALDPSK----- 794
            ...|:   ..|::||::             |.|..||.:..:..:.|       .|.|.|     
Mouse  1241 SSPGL---LRRMASPQRARPRGSGEPPPPPPLEPPAACMGLSTQSSLPSAVRTKVLPPRKGRGLK 1302

  Fly   795 ------TLDTPAENQTSVLAVLAPNQTP----TPEIRPVATKA-------AMKSTMPSPVHS-PI 841
                  .:.:|...:.:.....||..||    .||.||..:.|       .|...:|:...: |:
Mouse  1303 LEAIVQKITSPGLKKLACRVAGAPPGTPRSPALPERRPGGSPAGAEEGLGGMGQMLPAASGADPL 1367

  Fly   842 ---PQSRSTSTPLV-------AGDDSKSN---TPVPAKAPAPRRPPPRRLSMGMDASLLRFMIDD 893
               |.|||....|:       |.|..|:.   :|....:....|.|.:|...|...:|       
Mouse  1368 CRNPASRSLKGKLLNSKKLSSAADCPKAEAFMSPETLPSLGTARAPKKRSRKGRTGTL------- 1425

  Fly   894 PPAKKPGRKKKVTKEP--------------DFEDDD-----KPSTSAAAAAALAARQLSEAASAT 939
            .|:|.|..|:....:|              ..||:.     ||.|.....|       |:.....
Mouse  1426 GPSKGPLEKRPCPGQPLLLAPHDRASSTQGGGEDNSSGGGKKPKTEELGPA-------SQPPEGR 1483

  Fly   940 KSKPAAGAKKK------NAGVKGKKGSAGKGNAKNAKQ-NGKKSARKPAFTTDEDSTPAPTNGGG 997
            ..:|...|:|:      ::..|.|:.|.|:|...:|.. .|:.:.|:.......|  ||.     
Mouse  1484 PCQPQTRAQKQPGQASYSSYSKRKRLSRGRGKTAHASPCKGRATRRRQQQVLPLD--PAE----- 1541

  Fly   998 SVPELRFK-----------------SPFILI-KPDGSVSIKNTHSAEDVNEKQTKVKKAPHERKN 1044
              ||:|.|                 |||:.: |.|...:|...     ||....:.|  ||.:.:
Mouse  1542 --PEIRLKYISSCKRLRADSRTPAFSPFVRVEKRDAYTTICTV-----VNSPGDEPK--PHWKPS 1597

  Fly  1045 LRGMHSSTLSNRYD---ADTT-------------------------------DSTWICVFCKRGP 1075
            .....|||.|:..:   |..|                               .|..:|..|:...
Mouse  1598 SSAASSSTSSSSLEPAGASLTTFPGGSVLQQRPSLPLSSTMHLGPVVSKALSTSCLVCCLCQNPA 1662

  Fly  1076 HKLGLGDLFGPYLVTSDCDEYRAAVQTPGAQDIDGMFVNKRRREDMVKGQERNLP---------- 1130
            :...||||.|||.     .|:....:.|..::       |.|.|..:  :|.:||          
Mouse  1663 NFKDLGDLCGPYY-----PEHCLPKKKPKLKE-------KARLEGTL--EEASLPLERTLKGLEC 1713

  Fly  1131 -----AVPATLANI-------------------MQAP-KISMHKRKRKQTHDSSISYSDDPNESR 1170
                 |...|.|.|                   .|.| :.|.....|:...........|..|..
Mouse  1714 SASTTAAAPTTATITTPTALGRLSRPDGPADPAKQGPLRTSARGLSRRLQSCYCCDGQGDGGEEV 1778

  Fly  1171 SQCSSVDLLDCSTESKFVETFRGMGKTSENGFEVWLHEDCAVWSNDIHLIGAHVNGLDAAVWDST 1235
            :|.......:||.|:   .|..| |.|.|:    |:||.||||::.::|:...:.||..|:..:.
Mouse  1779 AQADKSRKHECSKEA---PTEPG-GDTQEH----WVHEACAVWTSGVYLVAGKLFGLQEAMKVAV 1835

  Fly  1236 RYQCVLCQQTGASICCFQRCCKAAAHVPCGRSANWSLSEEDRKVYCHLHRHEP 1288
            ...|..|.:.||:|.|..:.|....|.||......:..||:..:.|..|:..|
Mouse  1836 DMPCTSCHEPGATISCSYKGCIHTYHYPCANDTGCTFIEENFTLKCPKHKRLP 1888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5098NP_001261066.1 PHD_SF 1068..1284 CDD:304600 60/250 (24%)
Rai1NP_001032853.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..39
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 53..130
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..248
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..365 9/46 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 382..401 2/18 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 446..505 14/83 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 521..554 9/32 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 639..698 6/58 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 922..1297 75/398 (19%)
PHA03247 <939..1375 CDD:223021 88/458 (19%)
Nuclear localization signal. /evidence=ECO:0000255 1143..1160 4/18 (22%)
Nuclear localization signal. /evidence=ECO:0000255 1206..1223 7/20 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1322..1539 50/232 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1583..1614 9/32 (28%)
PHD_SF 1655..1884 CDD:419867 60/250 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1720..1753 5/32 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831410
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 139 1.000 Inparanoid score I4497
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14955
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.980

Return to query results.
Submit another query.