DRSC/TRiP Functional Genomics Resources

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Protein Alignment Muc55B and TIR1

DIOPT Version :10

Sequence 1:NP_611285.2 Gene:Muc55B / 37057 FlyBaseID:FBgn0034294 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_010927.1 Gene:TIR1 / 856729 SGDID:S000000813 Length:254 Species:Saccharomyces cerevisiae


Alignment Length:198 Identity:62/198 - (31%)
Similarity:101/198 - (51%) Gaps:24/198 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 STTEAPVSTTPEAPVSTTPVAPSTTEAPVPTTPVAPSTTEAPVPTTPVAPS----TTEAPVPTTP 308
            |:..|.|.....|..|.|..:.:|..:.|....|:...|..|..::.:.|:    ..:|   ::.
Yeast    55 SSMPAGVLDIGMALASATDDSYTTLYSEVDFAGVSKMLTMVPWYSSRLEPALKSLNGDA---SSS 116

  Fly   309 VAPSTTEAPVPTTPVAPSTTEAPVPTTPVAPSTTEAPVPTTPVAPSTTEAPVPTTPVAPSTTEAP 373
            .|||::.|  ||:..|||::.|  ||:..|.|::||  .::..|||::||  .::..|||::|| 
Yeast   117 AAPSSSAA--PTSSAAPSSSAA--PTSSAASSSSEA--KSSSAAPSSSEA--KSSSAAPSSSEA- 172

  Fly   374 VPTTPVAPSTTEAPVPTTPVAPSTTEAPVPTTPVAPSTTEAPVPTTPVASSTTEAPVSTTPVAPS 438
             .::..|||::||  .::..|||:|||.:  |..|||:|.|   .|...|..|:..:..|.....
Yeast   173 -KSSSAAPSSSEA--KSSSAAPSSTEAKI--TSAAPSSTGA---KTSAISQITDGQIQATKAVSE 229

  Fly   439 TTE 441
            .||
Yeast   230 QTE 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc55BNP_611285.2 DUF725 52..170 CDD:398779
motB <138..307 CDD:183756 13/62 (21%)
rne <258..447 CDD:236766 59/188 (31%)
TIR1NP_010927.1 SRP1_TIP1 19..112 CDD:395534 12/56 (21%)
Blue background indicates that the domain is not in the aligned region.

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