DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Muc55B and CG11470

DIOPT Version :10

Sequence 1:NP_611285.2 Gene:Muc55B / 37057 FlyBaseID:FBgn0034294 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_651700.2 Gene:CG11470 / 43480 FlyBaseID:FBgn0039671 Length:230 Species:Drosophila melanogaster


Alignment Length:252 Identity:64/252 - (25%)
Similarity:108/252 - (42%) Gaps:48/252 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VVLCLLLATSGFAL-----VPKHPADLVSMLARQQFAVRTLMAAPEARDDSTLINDCFNHYLEDQ 64
            :|.||.|   |.:|     :|..|...:     |:..:::...|....|.||   .||:.|....
  Fly     9 LVFCLSL---GLSLAVKLQIPFRPDAHI-----QELQLQSRELAEVHSDHST---QCFSIYKPKL 62

  Fly    65 TNVIMGYNLQYTGCLRTAQSGRDELTKESASEREALLDRTNKMCS-SLTEC----------DTLV 118
            ..:...:...:|.|:....:....::::.|.:|:.||...|..|| ..:.|          ||:|
  Fly    63 AKIADQFETNFTACISAYDNCTSHISEKYAEDRQILLRSANIGCSYPNSNCQVWTLEQQPLDTVV 127

  Fly   119 DGLEFFDCYRNASSDSYKVMFTLNSDSSLDFNRISAKYQVIETDLTDCVDSARLDYAHDMDACDE 183
            ..||   |....|::|.|..:.::::::....:|..:|.::|:..:.|::.|...|..|.....|
  Fly   128 SRLE---CASTNSAESSKTFYAISANATQIAVQIQEQYTILESRKSVCINDANRSYVEDTSDTYE 189

  Fly   184 NLTLCLKGGETSPEPTVPTTTSGTPVTVTTPEAPVSTTPEAPVTTTPVAPSTTETPV 240
            .|..|||.|        ||||:..|:|.     |.:||  |..|||.:   ||..|:
  Fly   190 LLNNCLKNG--------PTTTTCNPLTY-----PTTTT--ATTTTTTI---TTAAPL 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc55BNP_611285.2 DUF725 52..170 CDD:398779 26/128 (20%)
motB <138..307 CDD:183756 29/103 (28%)
rne <258..447 CDD:236766
CG11470NP_651700.2 DUF725 50..178 CDD:398779 29/133 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.