DRSC/TRiP Functional Genomics Resources

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Protein Alignment Muc55B and CG16762

DIOPT Version :10

Sequence 1:NP_611285.2 Gene:Muc55B / 37057 FlyBaseID:FBgn0034294 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_647722.1 Gene:CG16762 / 38310 FlyBaseID:FBgn0035343 Length:254 Species:Drosophila melanogaster


Alignment Length:255 Identity:61/255 - (23%)
Similarity:104/255 - (40%) Gaps:31/255 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLLATSGFALVPKHPADLVSM-------LARQQFAVRTLMAAPEARDDSTLINDCFNHYLEDQTN 66
            :|.:.:...|:...||:.:|.       |..|....|..:.:...:.|......||..|:.:...
  Fly    10 ILASLAMIGLLVLSPAEGISRPLPPYVGLPTQDGLTRLFLNSRVTQTDPFASVACFGGYIGESNL 74

  Fly    67 VIMGYNLQYTGCLRTAQSGRDELTKESASEREALLDRTNKMCSSLTECDTLVDGLEFFDCYRNAS 131
            :...|:..||.|...|...|..:..:..:.|..:...:.::||.|..|:.|...||.|.|:.|..
  Fly    75 IAELYSANYTKCYNAAADSRKGIDADFLATRRTIRLSSERVCSELRACNELNTTLESFQCHANVG 139

  Fly   132 SDSYKVMFTLNSDSSLDFNRISAKYQVIETDLTDCVDSARLDYAHDMDACDENLTLCLKGGETSP 196
            |::....::::.::|...:.:..:|:|::.....|...|...|..........|..|| .|...|
  Fly   140 SNNTVSTYSISGNASESASVLEERYRVVDLRHGQCCQRAERHYVESTARNYNYLQACL-DGRAKP 203

  Fly   197 EP-TVPTTTSGTPVTVTTPEAPVSTTPEAPVTTTPVAPSTTETPVPTTPVAPSTTEAPVS 255
            :| ..||:|:.|..|.||                    :||.|..||.|  |:|||||::
  Fly   204 KPMPKPTSTTSTSTTTTT--------------------TTTTTEAPTEP--PTTTEAPLN 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc55BNP_611285.2 DUF725 52..170 CDD:398779 25/117 (21%)
motB <138..307 CDD:183756 31/119 (26%)
rne <258..447 CDD:236766
CG16762NP_647722.1 DUF725 60..180 CDD:398779 26/119 (22%)
Blue background indicates that the domain is not in the aligned region.

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