DRSC/TRiP Functional Genomics Resources

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Protein Alignment Muc55B and CG5770

DIOPT Version :10

Sequence 1:NP_611285.2 Gene:Muc55B / 37057 FlyBaseID:FBgn0034294 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_611282.1 Gene:CG5770 / 37054 FlyBaseID:FBgn0034291 Length:213 Species:Drosophila melanogaster


Alignment Length:238 Identity:59/238 - (24%)
Similarity:100/238 - (42%) Gaps:41/238 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VLCLLLATSGFALVPKHPADLVSMLARQQFAVRTLMAAPEARDDSTLIND-----CFNHYLEDQT 65
            :||.:|..:........|.:.:.. |..|:.|       .||...|.:::     |||.|:....
  Fly     3 ILCTVLIFASVLAANAKPNNQIQS-ALDQYLV-------HARSLDTFVSEDMTTQCFNLYMPMLN 59

  Fly    66 NVIMGYNLQYTGCLRTAQSGRDELTKESASEREALLDRTNKMCSSLTECDTLVDGLEFFDCYRNA 130
            .|...::..|..|:.||.:....||.::..:::......:.:||:.|.||:..|...||:||.||
  Fly    60 QVAATFSSSYQDCITTANAQIANLTAQAEQQQKTYQSDVSTLCSAFTACDSNNDTANFFNCYANA 124

  Fly   131 SSDSYKVMFTLNSDSSLDFNRISAKYQVIETDLTDCVDSARLDYAHDMDACDENLTLCLKGGETS 195
            :.:...|::.|.|:::......|:..|.|:.....|.::.:.:|..|..|..:.|..|||.|   
  Fly   125 ADNDVSVIYNLASNAASSATSFSSGIQAIQDTEYQCTNTTQNNYVRDTAATYDLLDNCLKNG--- 186

  Fly   196 PEPTVPTTTSGTPVTVTTPEAPVSTTPEAPVTTTPVAPSTTET 238
                |||||:                     |::..||.||.|
  Fly   187 ----VPTTTA---------------------TSSSAAPQTTST 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc55BNP_611285.2 DUF725 52..170 CDD:398779 30/122 (25%)
motB <138..307 CDD:183756 25/101 (25%)
rne <258..447 CDD:236766
CG5770NP_611282.1 DUF725 47..166 CDD:398779 30/118 (25%)
Blue background indicates that the domain is not in the aligned region.

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