DRSC/TRiP Functional Genomics Resources

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Protein Alignment Muc55B and Y57E12B.4

DIOPT Version :9

Sequence 1:NP_001286561.1 Gene:Muc55B / 37057 FlyBaseID:FBgn0034294 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_504756.3 Gene:Y57E12B.4 / 179082 WormBaseID:WBGene00021964 Length:318 Species:Caenorhabditis elegans


Alignment Length:305 Identity:93/305 - (30%)
Similarity:125/305 - (40%) Gaps:55/305 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 QVIETDLTDCVDSARLDYAHDMDACDENLTLCLKGGETSPEPTVPTT---TSGTPVTVTTPEAPV 218
            :::|.||:|                |.::|..::...::|:..:|||   ||...:..|||:...
 Worm    38 EILEADLSD----------------DSHVTPFIERKHSTPKQNIPTTPCATSPAEIDTTTPQVSS 86

  Fly   219 S---TTPEAPVTTTPVAPSTTETPVPTTPVAPSTTEAPVSTTPEAPVSTTPVAPSTTEAPV---P 277
            |   ||.|...|..|.|||.:.|.:..|    .||.....||||...:..|.....::||.   |
 Worm    87 SEPFTTSENSSTAEPFAPSDSTTSINET----QTTSTHAETTPEIHYTEKPATLEPSKAPTDDCP 147

  Fly   278 TTPVAPSTTEAPVPTTPVAPSTT-EAPVPTT-------PVAPSTTEAPVPT-TPVAPST-TEAPV 332
            ||.|..:.|..|....|...||| |...|||       ||....||.|... :.||.:| :..|:
 Worm   148 TTLVVENKTLTPTEHKPTEHSTTIENTEPTTGRDRTTDPVISDKTETPSTNFSTVAENTASSTPI 212

  Fly   333 PTTPVAPSTTEAPVPTTPVAPSTTEAPVPTTPVAPSTTEAPVPTTPVAPSTTEAPV---PTTPVA 394
            ..|.| |:|.|...||     ..|||  .|.||.|..|......:..:.|:|...:   ||| ..
 Worm   213 YITKV-PTTFERSEPT-----MGTEA--TTDPVFPDKTTNFATVSEHSRSSTPNYITEHPTT-FE 268

  Fly   395 PSTTEAPVPTTPVAPSTTEAPVPTTPVASSTTEAPVSTTPVAPST 439
            .||.....||..|.|...   |.||.|...||:.. :..|:..||
 Worm   269 SSTESTDDPTPDVTPVVF---VQTTKVQELTTQTS-NGVPLLLST 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc55BNP_001286561.1 DUF725 52..170 CDD:283039 4/12 (33%)
Y57E12B.4NP_504756.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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